AMCG00015177


Basic Information

Item Value
gene id AMCG00015177
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 4181952 ~ 4184519 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015177
ATGGGCAGCCTGCTGAGATCCAGGGTTGTGACTGAGGTCGTGGCACAGGTGCAAGGCATGCTGGGACAGCTGGATTCGGCTACCCTGGACATCGCCGTGACAGGGGACTCCGGGGCAGGCAAGTCCTCCTTCATCAATGCCTTTCGGGGGCTGGGGGATGAGGATCCTGAGTCGTCACCCACGGGTGTGACTGAGACCACTCTGGAGATTACCGCATACCCCCACCCTGGGCTCCCCAACGTGAGGCTCTGGGACCTCCCCGGGATCGGGACGCCCCGTTTCCAGGCCGATCGTTACCTCGAGATGGTGGGGCTGGAGCGCTTTGACTTCTTCATCATCGTGTCATCCGAGAGGTTCCGGGAGAACCATGTCCTGCTGGCCGAGGCCGTGCGCAAGTGGGGGAAGAAATTCTACTTTGTGCGCAACAAGGTGGAAAACGACCTAGAGGCGTGGGGGCGCCGCAAGATGCGGGGGGCGGCAGCAGGaaaggaggagcaggaggatcTGCTGGGAAGGATCAGGGCAGACTGCGAGGGAAGCCTGCGGAAGATGGGGGGAGGCATGGGGACAATGGCCATCACGGTCTTCCTCATTTCCTGCTTCCACCCCAACAAGTTCGATTTCCCGCGGTTGCAGGAGACGCTGGCGCAGGAGCTGGAGGGTCACAAGAGACACGCCCTCCTGCTGGCCTTGCCCAATTTGTCTGCCACCACCCTGCAGGGGAAGCGGAAGGCACTGGAGGGGGGGCTCTGGAGGAGGGCCATGTCCGCCTGCCTGTGCACTGTGGCGCCAGGGGGCCTGGGGGTGGGCGGACGGGCGGGGCTGTCCGGCAGCGTGCCTCTCCTTTGTAGAGAGGTGACCTCGAGCGCGGGCCGGCAGCTGAGCGAGCAGGGGGTGGAGGACATGCTGGGACAGATGGCCATGGGGCAGCAGGTGGTGGTGGGGATGCTGCAGAGCCGGATCCCTGTGCTGGGCTCCCTCACCTGCGGGGGCGTGTCTTTCGTGGCCTGCTATTGGCTTCTGAGCTCGGCCCTGGGGGACCTGAGCCAGGATGCGGAGAGGGTAATGCGGAGGGCGCTGCATGGGGAGGAGCTAGACCGCGAAGAAGTCGAGGATCCGGGATTCTTCTATGGGGACTGAGCCCCAGACCAAATCAACACATGGGGCTCACTTCATTACCAATAGATGGCTCCTAATGAAATACCATATTGTCTTAATATTATGTaaagtgttaattaattaatctgtaatGCAGGATGCCCCTGTCCCCAGTGTACACAACTTCCCTGGTTGACTGCTCCACAGCTGACTGGGGCCTCCAAAAAGATGCAAGCTGAACACACATCTGTAGAAAAGGatatcagttttaattttaacaggAATGCCGCAGTGACATCATCAATGAGCGCCAGAGGGCCGGCTCGGGACGTTCTTGTGTGCGATGCAGGAGATAGGCAGATGAGAGAGTGTTCAGGGTCATTCAGACAGTTTAGCAGCCTTATTttagcagagacagagaggggccTGATTCACACAGCCAGCTGGTACAGCAGCACCGACTGGGTTCAGTACAGTCCCGTTCAGGTCATTTTATTATAAACCCAGAGGGCAATTGGTTTGCAGGCAGGtctaaaaatgacaacaatgtAAGCAATcgttaaaaaacacacaaacatacaatacaaaacatacatgcaATACACCAACAACAATCATGGCCAGAGCATCATTCTCTCCGCCAAGCCAGTCTGagccaaaataaactctatttacCTTTATGCGTCTGTTGGGGCTGTCCTGGAAACTGGGACAGGAAGTCAGCCTGAGAAGATTGGTACACTGGGAAATGTGGTGTATGACAGTGTAGGAAACAGGGATTACCACGATATTCCCTGATATATCCGGTGGGTTTACTATAGTATTCAGGGTCTAGGGTAGGAAAGCACAGCCACAGCCCATTGAGCCCCTATGGAAGAGCACTGTGAGACTCGGGCACATTCAAAGCATCAGAAGCCTATGGCAATTTTCCCCACTTGCATGAGGGAGGACAGAATCTGCTTTATGTGTAGAGGGAAGGTGTCAGAAATccagataatatatattttcaaaacctgCTACTAATAACTTTTTTCTTCATGTCTGCATTGTAAAGAAAAATCCTGATGCACAATATACTGTGTGCCTGTgcctaataataatgataataataataaatgttcacATTGGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015177 True 2228 mRNA 0.54 2 4181952 4184519

Neighbor

gene id symbol gene type direction distance location
AMCG00015179 NA coding downstream 12936 4167361 ~ 4169016 (-)
AMCG00015181 NA coding downstream 17963 4131402 ~ 4163989 (-)
AMCG00015178 NA coding downstream 142736 4037418 ~ 4039216 (-)
AMCG00015182 NA coding downstream 154537 4025654 ~ 4027415 (-)
AMCG00015174 NA coding downstream 212972 3950144 ~ 3968980 (-)
AMCG00015188 LOC104961374 coding upstream 21756 4206275 ~ 4209529 (-)
AMCG00015186 NA coding upstream 71748 4256267 ~ 4257343 (-)
AMCG00015187 NA coding upstream 91251 4275770 ~ 4281629 (-)
AMCG00015192 NA coding upstream 106078 4290597 ~ 4293297 (-)
AMCG00015191 psenen coding upstream 110914 4295433 ~ 4300203 (-)
G96010 NA non-coding downstream 142734 3903697 ~ 4039218 (-)
G96009 NA non-coding downstream 144781 3901812 ~ 4037171 (-)
G96018 NA non-coding downstream 211196 3969818 ~ 3970756 (-)
G95978 NA non-coding downstream 310618 3871076 ~ 3871334 (-)
G95968 NA non-coding downstream 451633 3729999 ~ 3730319 (-)
G96110 ctrl,LOC103045314,LOC108277669,LOC108441368,LOC107745200,LOC102296088 non-coding upstream 31208 4215727 ~ 4216894 (-)
G96115 NA non-coding upstream 67363 4251882 ~ 4255484 (-)
G96125 NA non-coding upstream 117113 4301632 ~ 4301940 (-)
G96127 NA non-coding upstream 130174 4314693 ~ 4314916 (-)
G96128 NA non-coding upstream 131678 4316197 ~ 4316936 (-)
G96094 NA other downstream 1511 4174879 ~ 4180441 (-)
AMCG00015180 NA other downstream 57989 4110319 ~ 4123963 (-)
AMCG00015164 NA other downstream 574760 3603683 ~ 3607192 (-)
G95921 NA other downstream 831510 3349879 ~ 3350442 (-)
G95854 NA other downstream 984763 3196421 ~ 3197189 (-)
G96191 NA other upstream 433192 4617711 ~ 4619264 (-)
AMCG00015203 NA other upstream 593874 4778393 ~ 4802904 (-)
AMCG00015210 NA other upstream 783531 4968050 ~ 4976350 (-)
AMCG00015211 NA other upstream 801053 4985572 ~ 5083187 (-)
AMCG00015230 NA other upstream 1209867 5394386 ~ 5463028 (-)

Expression


Co-expression Network