AMCG00015185


Basic Information

Item Value
gene id AMCG00015185
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 4188467 ~ 4196925 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015185
atggaCACCACGGCCGCGGCGACCACAGGGGCAGTCCCAGCTGAGAGCGCTGCAACCCGGCGGCGAGGGCGACTGCGGCCGCAGGAGGGAGACGAGTTAGCGGGGGTTATGGACGCGGAAGGACGCGTGGACGACGCCACCACTCTCCAGCAACCCCTATTGGCAGAGGAGCTGGCAGTGCGCTATGGCGCCATGAAGAGGAAGTGGCAACGCCTGCTGCCCGGCACCATGCGCATCCGCCTCAATGGCTCCGACGATGAACTGACGGCAGCGGTGCGGTTCTTCGAGCagcggagggagagagagaaagagagggagcgGCAGGAGGCCGTGTCCCCAGAGACTAGGGAGAGACTGTCCTTCCTGGAGTTACAGGCCCAGGTTCTGTTGGAGCGTGTCAGTCTGGACTTGGATCAGCTGACAGAAGCCATTCGGATCATAGACAAGGATGTCCCACGAACTGAGAGAGACCTGGACTACTTCCAAGGCGAGGGTTCCGCCAACCTGCTGGTCCTCAGAGAGATCCTCATCACTTTCGCTGCCTTCCACCCAGAGGTCAGTTATGCCCAGGGGATGAGTGACCTGTGCAGCCGGTTCCTAGAGGTGCTGGACTCTGAGGCTGAGGCCTTCTGGTGGCTGCTGCTGGGTTTCCAGAGGGAGTTTGACCACAGCGACGCCTTGCGGCTCTTCGAAGTCCTGAGCTGCGACCACCTGGAGCTCCTGACCCCTGCCCTGGATAGAGCCCTGTGCCATCAGAGACTGACCACTGACCACAGCACAGAGGAGGCAGGACCACCTCCCCTGGAGCCCCGCCCCTTCAACCCTGATTTGACGTTTGAGCTGTTTGTCTGCGCCGCCATCCTGATGCAGCACAGAGAAGCTCTCCTGCGTTGCCGTGGCGAGGTGCAGCTCATTCAGTTCACTAGCAGtctgCAGGGCAGGTTGGACCTGGACACTGTCCTGCTCTCAGCCACGCAGCACTTCCTCAACTACTGCAGCAACTTGTTgcggagggggtgggggtacCCCCAGGCTCCACCTTGCAACCCCCCCCTGCTGCAGCTCCGTGGCCTCTTCTCCTGATGGGGTGGTGGTGCAGGGTACAGTAGTCATTAAGACCAAGGgaccagggctggagaccctgctgtactgtgctggaCTCCCCTCCCCTGACCTCCCTACAGTTTGAAGCTCCAGAATTCAACAGGCTGCTGGAATCCCACCATGCTGTCCCGGAGAGAGGCCTGGCCCGTCAGACACTGGGCAGCCTGGCAGGGCAGTGTGGAACATTGCCAGCGAGAGACACTGGCCCACTGCCAAACCCCAGTGAGTTCTGGAACAGTCCTGCCTCAACACACGTATCAGTCAGCAGCAGAGAGTCATCTGGAGCTACAGAGATAAACTTGCTCTatgttaaaatagaaaaatacagagtgagacattaaataaataaacaaattaattaataaatacatacatgaaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015185 True 1484 mRNA 0.59 10 4188467 4196925

Neighbor

gene id symbol gene type direction distance location
AMCG00015176 NA coding upstream 76323 4070082 ~ 4112144 (+)
AMCG00015172 NA coding upstream 286129 3894791 ~ 3902338 (+)
AMCG00015171 NA coding upstream 299550 3884470 ~ 3888917 (+)
AMCG00015168 NA coding upstream 366004 3794466 ~ 3822463 (+)
AMCG00015167 NA coding upstream 431595 3754064 ~ 3756872 (+)
AMCG00015183 hsc70,LOC108441346,LOC103045816,LOC108241987,LOC107675864,LOC107745199 coding downstream 1561 4198486 ~ 4213829 (+)
AMCG00015184 NA coding downstream 18819 4215744 ~ 4218912 (+)
AMCG00015190 NA coding downstream 104710 4301635 ~ 4304037 (+)
AMCG00015189 NA coding downstream 108963 4305888 ~ 4363707 (+)
AMCG00015196 NA coding downstream 396048 4592973 ~ 4599435 (+)
G95977 NA non-coding upstream 317133 3871078 ~ 3871334 (+)
G95972 LOC103376870 non-coding upstream 377407 3810565 ~ 3811060 (+)
G95964 NA non-coding upstream 516797 3671389 ~ 3671670 (+)
G95950 NA non-coding upstream 587082 3601129 ~ 3601385 (+)
G95944 NA non-coding upstream 650131 3538132 ~ 3538336 (+)
G96059 NA non-coding downstream 37746 4234671 ~ 4283832 (+)
G96061 NA non-coding downstream 47462 4244387 ~ 4299500 (+)
G96063 NA non-coding downstream 54738 4251663 ~ 4255472 (+)
G96060 NA non-coding downstream 96134 4293059 ~ 4296312 (+)
G96072 NA non-coding downstream 102981 4299906 ~ 4300232 (+)
G96030 NA other upstream 88327 4089201 ~ 4100140 (+)
G95992 NA other upstream 216784 3969829 ~ 3971683 (+)
AMCG00015173 NA other upstream 239047 3933916 ~ 3949420 (+)
AMCG00015170 NA other upstream 271733 3903699 ~ 3916734 (+)
G95955 NA other upstream 546267 3641940 ~ 3642200 (+)
AMCG00015197 NA other downstream 386772 4583697 ~ 4667058 (+)
G96264 NA other downstream 679196 4876121 ~ 4879896 (+)
G96317 LOC100846954,LOC107575789 other downstream 824441 5021366 ~ 5022052 (+)
AMCG00015212 NA other downstream 871122 5068047 ~ 5077903 (+)
AMCG00015215 NA other downstream 887649 5084574 ~ 5119401 (+)

Expression


Co-expression Network