AMCG00015186


Basic Information

Item Value
gene id AMCG00015186
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 4256267 ~ 4257343 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015186
ATGGAAAAAGACACCACCATTATTCCAAAGACCACAGAGGATTTCGAGTACTACGAGGAAGAAGAGATGGATAGCGTGAGTTCCGCCTTGCACTACACCGCCATTGTCTGCTACTGCCTGGCCTTTGTGCTGGGCACCTGCGGCAATGGGCTAGTCATCTTCATCACCGGCTGCAAGATGAAGAAGACGCTCAACACTGTGTGGTTCCTCAACCTGTCCGTGGCCGACTTCCTGTTCACCGCCTTCCTGCCCATTCAGATTACATACAGCCTGCGCAACTACAACTGGCCCTTCAACGCCAACATGTGCCGACTCAACTCCTTCATCCTGGTGCTCAACATGTTCGCCAGTATCTTCCTCCTCACCGTCATCAGCCTGGACCGCTGCCTATCCGTCATGGCCCCTGTGTGGGCGCACAATAAACGCAGCCCCCGCAAAGCTGAGGCCCTCTGCCTGGTCGTGTGGATACTGGCGTGCCTCTGCAGTGTCCCCTTCATAGTCTACCGGGACAtccatttacacacaaacaagacCAGTTGTGCCTATGTCTTTCCTAAAGGCTCCGAGATGCAGACCTACCAGGCCCTGATCCTGACCCGCTTCTTCCTGGGCTTCTTGTTCCCCTTCCTGGTCATCGTGGCATCCTACGGCTCCATCGGCCTGCGCTACAGGAGCGTGCACAAGAAGAGGTCGTTCAAGCCCTTCCGAGTCATCCTGGCTGTCATCCTGACCTTCTTCATCTGTTGGATGCCCTTCCACGTGTTCCAGCTGTTGACGATAAGGATGCACAATAGCACCAACACCTTTAAAAAAGCTGTGGAAAATGGGTTGACGACCAGCACCAACCTGGCCTTCTTCAACAGCTGCCTGAACCCGGTGCTGTACGTGTGCATGTGCCAAGACTTCCGTGAGAAGTTCCGCAAGTCCTTCCTGCTGGTCTTCGAAAGTGCATTCATCGAGGAGCACCCCTTCCTGAGCAGCACGCGCCGCTCCACCGTGCAGATGGACTCGCTGGCCCAGGGGCTCCAGCCCAACGGGACACCCTCCACCGCCGCCTACCCCAACGATGACAACTAA

Function

GO:

id name namespace
GO:0007165 signal transduction biological_process
GO:0004930 G protein-coupled receptor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015186 True 1077 mRNA 0.56 1 4256267 4257343

Neighbor

gene id symbol gene type direction distance location
AMCG00015188 LOC104961374 coding downstream 46738 4206275 ~ 4209529 (-)
AMCG00015177 NA coding downstream 71748 4181952 ~ 4184519 (-)
AMCG00015179 NA coding downstream 87251 4167361 ~ 4169016 (-)
AMCG00015181 NA coding downstream 92278 4131402 ~ 4163989 (-)
AMCG00015178 NA coding downstream 217051 4037418 ~ 4039216 (-)
AMCG00015187 NA coding upstream 18427 4275770 ~ 4281629 (-)
AMCG00015192 NA coding upstream 33254 4290597 ~ 4293297 (-)
AMCG00015191 psenen coding upstream 38090 4295433 ~ 4300203 (-)
AMCG00015194 NA coding upstream 108093 4365436 ~ 4371175 (-)
AMCG00015193 NA coding upstream 151142 4408485 ~ 4424905 (-)
G96115 NA non-coding downstream 783 4251882 ~ 4255484 (-)
G96110 ctrl,LOC103045314,LOC108277669,LOC108441368,LOC107745200,LOC102296088 non-coding downstream 39373 4215727 ~ 4216894 (-)
G96010 NA non-coding downstream 217049 3903697 ~ 4039218 (-)
G96009 NA non-coding downstream 219096 3901812 ~ 4037171 (-)
G96018 NA non-coding downstream 285511 3969818 ~ 3970756 (-)
G96125 NA non-coding upstream 44289 4301632 ~ 4301940 (-)
G96127 NA non-coding upstream 57350 4314693 ~ 4314916 (-)
G96128 NA non-coding upstream 58854 4316197 ~ 4316936 (-)
G96130 NA non-coding upstream 63695 4321038 ~ 4321271 (-)
G96131 NA non-coding upstream 71753 4329096 ~ 4329398 (-)
G96094 NA other downstream 75826 4174879 ~ 4180441 (-)
AMCG00015180 NA other downstream 132304 4110319 ~ 4123963 (-)
AMCG00015164 NA other downstream 649075 3603683 ~ 3607192 (-)
G95921 NA other downstream 905825 3349879 ~ 3350442 (-)
G95854 NA other downstream 1059078 3196421 ~ 3197189 (-)
G96191 NA other upstream 360368 4617711 ~ 4619264 (-)
AMCG00015203 NA other upstream 521050 4778393 ~ 4802904 (-)
AMCG00015210 NA other upstream 710707 4968050 ~ 4976350 (-)
AMCG00015211 NA other upstream 728229 4985572 ~ 5083187 (-)
AMCG00015230 NA other upstream 1137043 5394386 ~ 5463028 (-)

Expression


Co-expression Network