AMCG00015207


Basic Information

Item Value
gene id AMCG00015207
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 4952437 ~ 4957869 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015207
CCAAAGGAAAAGCCGTGTTACTCACTGCCAACGGTCAAAAAGCTCCTGGAGCAGAAGCGCAAGAGGGAgacctcctcttcctcctcctcctcctcctctgcttcCGCCTCTGCTGCCAGCACAGGAGCCCCTGCTGCCACAACTCCGgTGCCAACACCAGTTCAAGCTATCCAACAAGGTGCTGCGAGCAGTTTCTCTGACGGCATGGGAGCAGCCGGTCACATGACCACCCCTGGGTACAGCGGATGGGTCAGTCCCGTCTCCCAGCTCCCCTCATCCCCACAGCAAGACTGCATCTTCACCAACCCGGCCGAGGACTATTTCCGGTGTCAGCAAGGTGGAATGGATTACAGGTCAAATCCTGTCTACACCAACTATGCCACCCAACAAACACCCACAGATACCAGCTACAGAGGCATCATGGCCATTCAGCCCTTTCCGGACTGCCCAGTGACGGCCACAGTCTCTGCCATTAGCCAAATGATGGTGCCACAGCCCCCCAGTTACTCCTGGGTCCCTCAGTGCCACTCCAGCACTGGGCACCAGGGCTTTGTGGGGCAGATGGATGCTGGGGTTCTGCAGGAGGCCAGGATGTTCTTGCAGGGGATGGACTACAGCAAGAAGATGTGGCAGGATGAGGACGGGGACACgATCCTGCACATCTACACTGCCAAGGGGCTGAGGGAGTATGCCTTTGCAGCTGCTGAGGACCTCGTCAAGATTGGCAGGCTAGACTCCAAAGAGCACAAGGGGAAGACTGCACTGCTGGTCGCTGTGACAGCCAACCAGCCTGAGATCGTCCAGGACCTCCTGCAGCTGGGGGCCGATGTCAATGCCTGCGATGTCAAAGGTCAGACAGCCCTCCACCTGGCTGCTACCTATGGCTTTCCCCGGGTCATGCAGGCGATTCTGTCAGCAGGACTCGGTGTGGACCTGGAAGCTCGCAATTTCGAAGggctgACCCCACTGCACTGTGCCACCATCTCCCACAACGGCACCATGAAGGCCCTGTCCACCCTGTTACCAGGGCAGACCAACGCCAGTCTGCAGAGCCAGGCCCAGGACAAGCTCTCATGCGTGCAGCTGCTCCTCAGCTGTGGAGCCTCTCACCTCAGTCAGGACATAAAGAGCAATAAGACAATGTTGCACTTGGCTGTGAAGGAGGGGAACCTGCAGCTGGTGCAGTACCTGCTGGGACTCAGCTTCCCTGACATGAATGCCTTCGTCAACTTGAAGGCCCACGGCAACACTGCTCTGCATATGGCAGCAGGTCTCCATGGCAGCTGTTACCAGGAGGACATGATCCGGCTGTTGCTCAGCGTGGGGGCCGACCCCAGCATCCGGAACCTGGAGAATGACCAGCCAGCCCACTTGCTGCAGagtggagagaggggagaacaGctcaaGCTCATTTTGAAGAAGGGGAGAGCGGCTTCTTCCCGTCGACGAATCGTATCCTTATAG

Function

GO: NA

KEGG:

id description
K14214 NFKBID; NF-kappa-B inhibitor delta

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015207 True 1464 mRNA 0.58 11 4952437 4957869

Neighbor

gene id symbol gene type direction distance location
AMCG00015205 NA coding upstream 90621 4846954 ~ 4861816 (+)
AMCG00015204 NA coding upstream 114067 4806896 ~ 4838370 (+)
AMCG00015206 NA coding upstream 146052 4804650 ~ 4806385 (+)
AMCG00015201 NA coding upstream 170007 4768539 ~ 4782430 (+)
AMCG00015200 NA coding upstream 186978 4743497 ~ 4765459 (+)
AMCG00015213 NA coding downstream 84632 5042501 ~ 5047188 (+)
AMCG00015218 NA coding downstream 106451 5064320 ~ 5065243 (+)
AMCG00015214 NA coding downstream 171472 5129341 ~ 5136836 (+)
AMCG00015221 NA coding downstream 361689 5319558 ~ 5351935 (+)
AMCG00015223 NA coding downstream 436511 5394380 ~ 5398379 (+)
G96205 NA non-coding upstream 282262 4669472 ~ 4670175 (+)
G96204 NA non-coding upstream 283047 4668893 ~ 4669390 (+)
G96203 NA non-coding upstream 283653 4668322 ~ 4668784 (+)
G96083 NA non-coding upstream 558968 4388148 ~ 4393469 (+)
G96072 NA non-coding upstream 652205 4299906 ~ 4300232 (+)
G96326 NA non-coding downstream 78169 5036038 ~ 5036271 (+)
G96384 NA non-coding downstream 236103 5193972 ~ 5194179 (+)
G96424 NA non-coding downstream 499964 5457833 ~ 5459048 (+)
G96512 NA non-coding downstream 794299 5752168 ~ 5753255 (+)
G96513 NA non-coding downstream 797214 5755083 ~ 5755350 (+)
G96264 NA other upstream 72541 4876121 ~ 4879896 (+)
AMCG00015197 NA other upstream 285379 4583697 ~ 4667058 (+)
G96030 NA other upstream 852297 4089201 ~ 4100140 (+)
G95992 NA other upstream 980754 3969829 ~ 3971683 (+)
AMCG00015173 NA other upstream 1003017 3933916 ~ 3949420 (+)
G96317 LOC100846954,LOC107575789 other downstream 63497 5021366 ~ 5022052 (+)
AMCG00015212 NA other downstream 110178 5068047 ~ 5077903 (+)
AMCG00015215 NA other downstream 126705 5084574 ~ 5119401 (+)
G96415 NA other downstream 431068 5388937 ~ 5391723 (+)
G96420 NA other downstream 469010 5426879 ~ 5465434 (+)

Expression


Co-expression Network