AMCG00015210


Basic Information

Item Value
gene id AMCG00015210
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 4968050 ~ 4976350 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015210
agagagagagagagagagcatcaaACCTAAGCTCCCGACACACTGCAGTCATGGCTACGACAGGAGATTATGAAACCCTGAGGACCACAGGAGTGATTCTGGCTGTCATCATGTTTGTGGCAGGGATCCTCATAGCCCTGACGGCAGCCCAGTGGAAGGCCCTCAGCCACCAAAGACAGAAGGTGAGCTGTCGATATGTGGAGGGATGtgccACCTCAGACCGTATagagggagagcaggaggtGGGGAGGGGAGTGGCTGTCAGTTGGAGGAGACccaacacagagagggagagggagagaagccCCAGAGAGCCCCTCTCAGACAAACTGGAAAACATCTACGCCTTCCCAACCAGCATCGGCTCCATGCAGAAACGCCTTTGTCAGTTCCAGCCATAATCCAGGCAATCTGTTTATCCCATTTATATCCATTGTGAACACCACCTCAAAGTGCTTTCACACAGTCTGGGTGCAGGAGGGAACGCAGTTAGTGCAGAGGATAAAAACTATAGGGCTTTGGATGTCATTCAAGTCCTTTTACTAgttgatttttctttcacaCAATCAAGCAGTACACTTTCTTATACTTTCCCCAGGCTAGTCTGACCCAATCCATCCCATTTCATAAATCAGGCAGCACTAATTAAATAGGCACAACCGTCCTATAATACTATAGACTTAGAAATTACAATGTTCTGAGGGCTGCACCTGCATAacagtgaacattttgaaatgttctacTTCACGATCAAGTGTACTCTTTATCTTTGTCAATttgactaatttatttattcaaatgccATTGCTTGTTTACATTTAGCAGCAGCATTTTCTAAAGTCAAAGAAATATGAAAGGAATCAATTGAAAAGTAACAGTGAAGCATACGATTCTCAATCTGCGTCACTGGTATCCAAATTAGAAGTTCTGGGATATTGTCCCCACTTTGCTGGGATTTAAAACAAGTTAAGGGTTTGACATTCCCACTGGGGTCTGAATGTCATATATGGGCCAAGTTTAAATACATGAAGCCTATAGTATGGGGTAATCAAGGGGTTAAATGTGTTCGAGGCCCAACTGAATAGAAATCTGTTTGCAAGCTTTCTTGCACCAGCTTTTATTCACCCAAGACTGCAAGCTTTCTGAAACCAAAGACTGAGTACAGAAAAGATCACACTAAGACAAAGGTAAATTAATGGGATTAAATTAGCCCTCAATGATGGCTAAATCCATCTGCAACAAAAACGCAAAATAGACATCACAAAGGCTGGGGCACTGTGGTCACCTCTCGCAGGTGACGCTATATCTGCAGAATAGCTCCCTCTCAGCTGTGCCACTGTGtggtggaaagaaagaaagacacgGGTTGATTGCACCAGTCTACATCCAACCGCCACAGCTTTTCCTCTCCCTCAACCTACTTCCAGGCCGATTGCATGaagagacaaaaatatataaatatataagatgTAGCACTTTTTAATGTACGAAATGAATGCACTAGTGATTTAACCATGTAGGTCAGATTGTGTATGAGGAAAAGTGGAGAGTTTCTTTTTTCCAGAagggtggggcgggg
>TU120086
CGCTTTCAAACACACCTCTGCAACccctgcagtgtgtttgtgtgtgtgtgtgagagagagagagagagagagagagagagagagagagagagagagagacgagacagagagagagagagagagagagagagagagagcatcaaACCTAAGCTCCCGACACACTGCAGTCATGGCTACGACAGGAGATTCAACGATTCAAAGTGATTTCGAATATGATTATGAAACCCTGAGGACCACAGGAGTGATTCTGGCTGTCATCATGTTTGTGGCAGGGATCCTCATAGCCCTGACGGCAGCCCAGTGGAAGGCCCTCAGCCACCAAAGACAGAAGtgccACCTCAGACCGTATagagggagagcaggaggtGGGGAGGGGAGTGGCTGTCAGTTGGAGGAGACccaacacagagagggagagggagagaagccCCAGAGAGCCCCTCTCAGACAAACTGGAAAACATCTACGCCTTCCCAACCAGCATCGGCTCCATGCAGAAACGCCTTTGTCAGTTCCAGCCATAATCCAGGCAATCTGTTTATCCCATTTATATCCATTGTGAACACCACCTCAAAGTGCTTTCACACAGTCTGGGTGCAGGAGGGAACGCAGTTAGTGCAGAGGATAAAAACTATAGGGCTTTGGATGTCATTCAAGTCCTTTTACTAgttgatttttctttcacaCAATCAAGCAGTACACTTTCTTATACTTTCCCCAGGCTAGTCTGACCCAATCCATCCCATTTCATAAATCAGGCAGCACTAATTAAATAGGCACAACCGTCCTATAATACTATAGACTTAGAAATTACAATGTTCTGAGGGCTGCACCTGCATAacagtgaacattttgaaatgttctacTTCACGATCAAGTGTACTCTTTATCTTTGTCAATttgactaatttatttattcaaatgccATTGCTTGTTTACATTTAGCAGCAGCATTTTCTAAAGTCAAAGAAATATGAAAGGAATCAATTGAAAAGTAACAGTGAAGCATACGATTCTCAATCTGCGTCACTGGTATCCAAATTAGAAGTTCTGGGATATTGTCCCCACTTTGCTGGGATTTAAAACAAGTTAAGGGTTTGACATTCCCACTGGGGTCTGAATGTCATATATGGGCCAAGTTTAAATACATGAAGCCTATAGTATGGGGTAATCAAGGGGTTAAATGTGTTCGAGGCCCAACTGAATAGAAATCTGTTTGCAAGCTTTCTTGCACCAGCTTTTATTCACCCAAGACTGCAAGCTTTCTGAAACCAAAGACTGAGTACAGAAAAGATCACACTAAGACAAAGGTAAATTAATGGGATTAAATTAGCCCTCAATGATGGCTAAATCCATCTGCAACAAAAACGCAAAATAGACATCACAAAGGCTGGGGCACTGTGGTCACCTCTCGCAGGTGACGCTATATCTGCAGAATAGCTCCCTCTCAGCTGTGCCACTGTGtggtggaaagaaagaaagacacgGGTTGATTGCACCAGTCTACATCCAACCGCCACAGCTTTTCCTCTCCCTCAACCTACTTCCAGGCCGATTGCATGaagagacaaaaatatataaatatataagatgTAGCACTTTTTAATGTACGAAATGAATGCACTAGTGATTTAACCATGTAGGTCAGATTGTGTATGAGGAAAAGTGGAGAGTTTCTTTTTTCCAGAagggtggggcggggggggggacTGACACtaagatgtattttatgtaaaacataaattatacgTTTCATTAtaagttttaattattcatttttaaagcctCATTTACCCCATTCAGCCTTGTGTAAAACTGAGCATACAATGTGTAATCAAGTgagatttgattgttttattttctatgagatgcaaaaatacaaaataataaaacaacttaaacttctgatgaacaattatttcaataaacacTTTCAATCATA

Function

GO:

id name namespace
GO:0005540 hyaluronic acid binding molecular_function
GO:0031406 carboxylic acid binding molecular_function
GO:0043177 organic acid binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015210 False 1579 mRNA 0.44 4 4968290 4976231
TU120086 True 1942 TUCP 0.42 5 4968050 4976350

Neighbor

gene id symbol gene type direction distance location
AMCG00015208 NA coding downstream 95330 4871054 ~ 4872720 (-)
AMCG00015209 NA coding downstream 97021 4870014 ~ 4871029 (-)
AMCG00015202 LOC106605622 coding downstream 288999 4670704 ~ 4679051 (-)
AMCG00015199 NA coding downstream 337828 4619364 ~ 4630222 (-)
AMCG00015195 NA coding downstream 515103 4436545 ~ 4452947 (-)
AMCG00015217 NA coding upstream 113484 5089834 ~ 5113520 (-)
AMCG00015216 NA coding upstream 142848 5119198 ~ 5125146 (-)
AMCG00015220 NA coding upstream 187057 5163407 ~ 5166705 (-)
AMCG00015219 NA coding upstream 221737 5198087 ~ 5213200 (-)
AMCG00015227 NA coding upstream 258782 5235132 ~ 5241035 (-)
G96300 NA non-coding downstream 56545 4894754 ~ 4911505 (-)
G96271 NA non-coding downstream 78729 4882069 ~ 4889321 (-)
G96208 NA non-coding downstream 298764 4668903 ~ 4669286 (-)
G96148 NA non-coding downstream 575070 4390840 ~ 4392980 (-)
G96136 NA non-coding downstream 623981 4343868 ~ 4344069 (-)
G96314 NA non-coding upstream 40036 5016386 ~ 5016609 (-)
G96318 LOC100846954 non-coding upstream 44910 5021260 ~ 5022065 (-)
G96329 NA non-coding upstream 61940 5038290 ~ 5038491 (-)
G96375 NA non-coding upstream 180437 5156787 ~ 5157140 (-)
G96385 NA non-coding upstream 217473 5193823 ~ 5194138 (-)
AMCG00015203 NA other downstream 165146 4778393 ~ 4802904 (-)
G96191 NA other downstream 348786 4617711 ~ 4619264 (-)
G96094 NA other downstream 787609 4174879 ~ 4180441 (-)
AMCG00015180 NA other downstream 844087 4110319 ~ 4123963 (-)
AMCG00015164 NA other downstream 1360858 3603683 ~ 3607192 (-)
AMCG00015211 NA other upstream 9222 4985572 ~ 5083187 (-)
AMCG00015230 NA other upstream 418036 5394386 ~ 5463028 (-)
AMCG00015244 NA other upstream 777243 5753593 ~ 5757109 (-)
AMCG00015257 NA other upstream 1049018 6025368 ~ 6072125 (-)
AMCG00015256 NA other upstream 1073127 6049477 ~ 6064159 (-)

Expression


Co-expression Network