AMCG00015217


Basic Information

Item Value
gene id AMCG00015217
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 5089834 ~ 5113520 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015217
ACTACTCAGCACCGGACTCGGGAGGCACAACTTTTTACGAACCAGAGACAATGGATTCAGGACCACGGACAGCGGCTTCCCGGTCCGTTCCTGCAGAGTCTAAGTGGTGAGCAGCGCCTGCGCAGCAGGACCAACAGCGCTCCTCCtccactctctcacactcctGTAGAAAGGGAAAAGGGAGAGATTACTCAGTCCAAGAGGAACTTGCATATGACCAGTGACACGTATGATCTAGACCTTTTAGGTCCAGTGGCGTTGGGATCCCTCGGAAGACAGAGGACTGTCGGCCTGCTGAAGATGAACCTagagcagaaggaCAGAACTGAAGCTGCAGCTATGGGTGTTGAAGAGACACTGCGCTTACTGGGGGCGACTCTACTCCTCCTGCCTGGTGTCCTTGGTGGGAACTGGGCTGTGTGGTATAAACCTGGATATATCTGTGCCGTGAGAGGCTCCTCTGTAGTCCTGCCCTGTTCATATGATTATCCTGATACCTATATCAGCTATTTAGGAACATATAGATATGAGGTGCAGACAGTGATGTGGTGTCACAATAATAGGGACTGTCTTGGTACCTCATATGTGTATCACAGTGGATGGGGTTCAATCAGCCCTGAATACCGACACAGAGCAGAGTACCTGGGGGATAAACAGAAGATCTGCACTTTGAAGATAAACGACATAAGAACATCTGACAGTGGGAAATATAGATTCAGATTTGAAACCAGTCATCCTAGAGATAAAGTGACTGGTAGGAATGGAgtgactctctctgtctctgAACTGAAAATTATAATGGTCCCATCAAGAATGAATGGAGCAGTGAGAGAAGGAGACAGTGTGACCCTGACCTGTAGCACAGAGAGCTGCTCTCCAACACAGACAGAGCTCAGCTGGTTTAAAAATGGCCGGcccatctctcacacacagacaccagccAACACACTGCGCTTTAATCCTGTTTCCTATCAAGACTATGGGAACTACTCCTGtgctgtaaaatacaatatcaacAGTTCAATTTCACAGTTCACATTGGATGTTAAATGTCTGTCCAGTGTGGCGCAGGGCCTTCCTCCACTGGCATGGGTGGGATTGGGAGCTGCTGCCCTTACTGTCACTGTTCTTGGTGTGACTGTGATTTGTGTCAAGAGGAGGAAAGCAAAACCAGGCCCAGAGGAAGAGCCACAGGTGGCAGAGGAAAATGTGTACAATAACGTACTGGACCCATTGCCAAGGCAGGAGCAGAAGCACACTATGGTGGATCTGGACAATGAGCTGAGCTACAGCACCATTCACTTCCAGCCCAAGAATCCCCCATCAGAgCCTGTGGACATGAGCCTAGTGAATGACGATGCAACCATTTACAGCGAAGTCATGAGATAAGAACTTGGAAATGGagaggcgtcacaatctggaacaaactccccagcgatgtggtagaagttgaaaatttgggaacatttaaaaatagactggataggatccttggatcacttcattattaatggacaccaaacgagcacgatgggttgaatggattcctctcatttgtaaactttcttatgttcttatgttctttcttatgttgcttgaaaaaaatagaaagtgcATTTTGTGTTGTAGAAATGAGGTGGATTCGACATTTTCGAGCACCTTTGTTGCTGTAACATTATTAAATGAGTTATGATTTTCTAGAAGCAAAGTTATGTATTAGAATGTAAAACCAATCAAAGTCATAAGAAAAATCATGTGACTACCTGCTTTGCCACAAGAACATATGAATGCAAATGTGTGTGAAACCAGTCTGTGGGACGCTGTCAGGGAGACTCTCCTTCTTTCAGGGTGaacatgtgtatttgtattatgtatttgtacttaTAATAGAGGCCAGTCAATAAGTATTAAACTGTCTCATGATTTTAATGTGACAACGTGATTCAATATTGTCACTATAATCATGTAGCCTATTTtgggatattttaattatgttgaaCTGACACTGATTGgacaaattgtatatttatatgtattaattaactgTGTCATTTTACCACCaatcatttaaaacagcaaACTAGTTTCCTCATACTATTAACCATAGTTTAAGTTCCTATGTTGTactgttgattttgtttaaatatatatttttaaatatttgtatatccTAGGATAGGGgttcctggtcctggaggaccccctaccctgctggtttctgaTCCAACCTAGCTctcaattccttaattgaagtaacagtctgcttagatttgacttttttaattgtttaataaaagaCTTGGTTCTTTAAGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015217 True 2314 mRNA 0.43 10 5089834 5113520

Neighbor

gene id symbol gene type direction distance location
AMCG00015208 NA coding downstream 217114 4871054 ~ 4872720 (-)
AMCG00015209 NA coding downstream 218805 4870014 ~ 4871029 (-)
AMCG00015202 LOC106605622 coding downstream 410783 4670704 ~ 4679051 (-)
AMCG00015199 NA coding downstream 459612 4619364 ~ 4630222 (-)
AMCG00015195 NA coding downstream 636887 4436545 ~ 4452947 (-)
AMCG00015216 NA coding upstream 5678 5119198 ~ 5125146 (-)
AMCG00015220 NA coding upstream 49887 5163407 ~ 5166705 (-)
AMCG00015219 NA coding upstream 84567 5198087 ~ 5213200 (-)
AMCG00015227 NA coding upstream 121612 5235132 ~ 5241035 (-)
AMCG00015231 NA coding upstream 245039 5358559 ~ 5359929 (-)
G96329 NA non-coding downstream 51343 5038290 ~ 5038491 (-)
G96318 LOC100846954 non-coding downstream 67769 5021260 ~ 5022065 (-)
G96314 NA non-coding downstream 73225 5016386 ~ 5016609 (-)
G96300 NA non-coding downstream 178329 4894754 ~ 4911505 (-)
G96271 NA non-coding downstream 200513 4882069 ~ 4889321 (-)
G96375 NA non-coding upstream 43267 5156787 ~ 5157140 (-)
G96385 NA non-coding upstream 80303 5193823 ~ 5194138 (-)
G96452 NA non-coding upstream 284574 5398094 ~ 5559599 (-)
G96454 NA non-coding upstream 294844 5408364 ~ 5451534 (-)
G96458 NA non-coding upstream 313359 5426879 ~ 5463856 (-)
AMCG00015211 NA other downstream 6647 4985572 ~ 5083187 (-)
AMCG00015210 NA other downstream 113484 4968050 ~ 4976350 (-)
AMCG00015203 NA other downstream 286930 4778393 ~ 4802904 (-)
G96191 NA other downstream 470570 4617711 ~ 4619264 (-)
G96094 NA other downstream 909393 4174879 ~ 4180441 (-)
AMCG00015230 NA other upstream 280866 5394386 ~ 5463028 (-)
AMCG00015244 NA other upstream 640073 5753593 ~ 5757109 (-)
AMCG00015257 NA other upstream 911848 6025368 ~ 6072125 (-)
AMCG00015256 NA other upstream 935957 6049477 ~ 6064159 (-)
AMCG00015267 NA other upstream 1255234 6368754 ~ 6384620 (-)

Expression


Co-expression Network