AMCG00015224


Basic Information

Item Value
gene id AMCG00015224
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 5462752 ~ 5470874 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015224
ATGGTTGTTGATGGCATCCAAGACTGTTATCCAATCAGTTACAAGACCTGTAATGTCATGGGGGACCCTCACTTCCTCAGCTTTCACTTCCAGGGCAGCTGTGTCTACAGGCTGGTTGGTGTCTGCTCCAAGGACCCCAGCATCCAGACCTTCGATGTCTCCCTGGAGAACAACAACCGTGGCAGCCCACGAGTGTCCTTTGCCAAGGTAGTGACAGTCAAGGTCTTCGACAGCTCCATCACCATCAGTAATGATTACCGAGGGAAGATCCTGGTAAGCGATGTCGATAGTTTTTCAACTAGGCCCCTGGGCGACTGCCTGGGTAAGGTAGACTATGCTCGCTTCCATGGCAGCTGCATGTTCGACATCCAGCTGAACAAGGGCCTACAGAAAGCAGCTTGTGACGCCATCGCTGCCTATGTGGAGCAATGTCAAGACGCCGGGGGCCAAATAAGTAATTGGAGGAAGAAGGACTTCTGTGCTCTTTCCTGCCCGAAGAACAGCGAGTACAGCACTTGTGCTCCTGGGTGCCCTGCCACGTGCTACAGCATGAGTGCCCCCACCAGTTGCAAAGCTGCCTGTAGAGAGGGCTGCCAGTGCAAGCCAGGCTTCCTGCTGAGCGACGAAGAGTGTGTGCCCATACAGGAATGTGGTTGCAAGCATGAGAACTGCTACTACAGGTCAGGTCAGATCTTCTACACAGACGGAGACTGTCAGCTTCGCTGCAGTTGCCAATCAGGCATTGTGGCCTGTCAGGTTGCTTCCTGTGGTCCCCAGGAGATGTGCAGGGTTTTAGATGGCGTCCAAGGTTGCCACCCCAAAGCCTACAGCACATGCAGTGTGTCGGGCCACTCACATCACCTCACCTTCGATAAACTCAGTTATGACTTCCAGGGAGGCTGCAGCTACACGCTGGTCACAGTGTCAAACTCCGCTGCCGTCAACTTGCCATGGTTCTCAGTCTTTGCAGAGAAGGAGCATGTCATGGTGGGCAAGGTGTCCACAACTCGCTTGGTTACTATGAGGGTGTTTGGGGTCTCCATCATCCTGGAGAAGGGATTTCCCAGGCAGATTTGGATGAATGGTACCCATGTCAACCTGCCCTTCTCTCTGGATGGAGGGATACTTCAGGCTTCCCAGGCAGGCATGGGGATAGTGGTGCAGGCCAACTTTGGTTTGAGAGTGACCTATGACCTCTGGCAAATGGTCTTGGTCAAGGTGCCATCCACATACCCAGGCGTGATTGGCGGACTCTGCGGAAACTACAACAACCAGAAAGATGATGAGTTTGCCCTTCCTCTAGGTGGCCTGGTGGGCAGCGCCAACATGTTTGGGATCTCCTGGAGAATGGAGGGTGAAAAGGAGCTGTGTGGTGATTTCTGTCTGCAGGGAGGCTGCCCCAAACCGGGAGATAAGGAGAGAGAAGAGCTGACAAAATCTGACAGGTGTGGCCTGATCTCAGCTCCCAAAGGACCACTGGCCGATTGTCAACCAGTGTTTCCCCCAGCAGGCTTCCTGGAAAATTGCATTGCCAACAGCTTCACAGTGGGAGGCAAGACAGAAGCCGTGTGTCTGGGGATCCAGGCTTACGTTACTGCCTGCCAGGAGGCTGGGGTGACCCTGAAAGACTGGAGGAGCCGCAGCTTCTGTCGTAAGTACTGGGGAACCCCGATGCATTTCAGTAATAGGGATGTGAGTGTGACAGATGGGGATAAGTGTGTTGAGATACAGGACTGTGGCTGTGAGGTGGATGGGATGTACTTGAAGATCATCTACATGAACAAGTGCACCCAGAAATGCAGCTGTAGCTCCAGGCACAACTCTGTATGCGAGGAGACCTCCTGCCCAGCCAACACCCAGTGTGCGGTGAGGAACAGGGCCCTAGGCTGCTGCCCCACTCACGTCACCTGCATCCTCATGACCTGCCTCTGGGAGCGTAGTCTGGTTTTTATCCTtgacagagagcagaaggaCAGAACTGAAGCTGCAGCTATGGGTGTGGAAGAGACGCTGCGCTTACTGGGGGCGACTCTGCTCCTCCTGCCT

Function

GO: NA

KEGG:

id description
ko05206 MicroRNAs in cancer

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015224 True 2046 mRNA 0.54 7 5462752 5470874

Neighbor

gene id symbol gene type direction distance location
AMCG00015222 NA coding upstream 15807 5445984 ~ 5446945 (+)
AMCG00015226 NA coding upstream 28236 5426904 ~ 5434516 (+)
AMCG00015223 NA coding upstream 64373 5394380 ~ 5398379 (+)
AMCG00015221 NA coding upstream 110817 5319558 ~ 5351935 (+)
AMCG00015214 NA coding upstream 325916 5129341 ~ 5136836 (+)
AMCG00015225 NA coding downstream 708 5471582 ~ 5476576 (+)
AMCG00015237 NA coding downstream 31591 5502465 ~ 5509697 (+)
AMCG00015241 NA coding downstream 78321 5549195 ~ 5559773 (+)
AMCG00015236 NA coding downstream 89204 5560078 ~ 5570355 (+)
AMCG00015234 NA coding downstream 126172 5597046 ~ 5603355 (+)
G96424 NA non-coding upstream 3704 5457833 ~ 5459048 (+)
G96384 NA non-coding upstream 268573 5193972 ~ 5194179 (+)
G96326 NA non-coding upstream 426481 5036038 ~ 5036271 (+)
G96205 NA non-coding upstream 792577 4669472 ~ 4670175 (+)
G96204 NA non-coding upstream 793362 4668893 ~ 4669390 (+)
G96512 NA non-coding downstream 281294 5752168 ~ 5753255 (+)
G96513 NA non-coding downstream 284209 5755083 ~ 5755350 (+)
G96543 NA non-coding downstream 394170 5865044 ~ 5919123 (+)
G96568 NA non-coding downstream 554471 6025345 ~ 6067602 (+)
G96572 NA non-coding downstream 580524 6051398 ~ 6064774 (+)
G96415 NA other upstream 71029 5388937 ~ 5391723 (+)
AMCG00015215 NA other upstream 343351 5084574 ~ 5119401 (+)
AMCG00015212 NA other upstream 384849 5068047 ~ 5077903 (+)
G96317 LOC100846954,LOC107575789 other upstream 440700 5021366 ~ 5022052 (+)
G96264 NA other upstream 582856 4876121 ~ 4879896 (+)
AMCG00015277 NA other downstream 1215477 6686351 ~ 6691799 (+)
AMCG00015293 NA other downstream 1526723 6997597 ~ 7080788 (+)
G97006 NA other downstream 1944495 7415369 ~ 7415762 (+)
AMCG00015324 esrra,LOC107669367,LOC107715365,LOC104926321,LOC106534575 other downstream 2475334 7946208 ~ 7956114 (+)
AMCG00015334 NA other downstream 2603307 8074181 ~ 8078832 (+)

Expression


Co-expression Network