AMCG00015230


Basic Information

Item Value
gene id AMCG00015230
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 5394386 ~ 5463028 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015230
ATGAACACATTGTGGATATCACAGAAACAAGTGGCCTGTGTGTCAGCCAGATTAGGCAACTGCAAATGCCGCTTGATCCACAACACCCTGAAAAACACGAACAGAATTCTCAGTGCTGCAGGTTATGATGTTGAATCCATTGTCCTAAAAATCTACAGCGAATTCTCATGCTCAGCCAAAAAAGCAGAATCTCTGAAAGAGTTTTGCGAGTTCACTTCAATACAGTACAAAGAGATACTGAGGCATGTACCAACCCATTGGTTATCTCTATTGCCTGCAGTTCAGCAGATCTTGGAGCGTTGGCCTGCCCTGAAGGTGGACAACCACATCAAAGTGACCCCCAGTCCTGAGATTGGTGACCATTCCGTCAAAGGACTCAACTACAGAACCCTTAGTGAGGATGCAGGTGACGGAGACATCGAAGGTCTGGAGGCTGGGATCCTTGGAGCAGACACCAACCAGCCTGTAGACACAGCTGCCCTGGAAGTCAAACTGCAGGCCATCAAAGCTGAGGAAGAGGCCACAGTATTTCTGGCTCCTGTACAAGGCTGTATCTTCATCAGAGCAGGTGGGGCAGTAGCCCTTGCAATAGTGCCAACAGAAGGGGTCACGGTCAGGAACACTCCAGGACTTGGCCCATTCAGTCATGTTCCCGACAAGGCTGCCCGCTGGCGTCTGCAGGTCATCCTTCTTGTCTTCGTTGTAGGTTCCACAAAGGCCCGCGAGGTTGTCGTAGTAGCTGCTGCTCACTGTCACCATGAAGAGCGTGGTCCAGTCAAACACAATCTCCAGACCGTAATCTGTCTGTACAACAGCCCTGATTCCTGA
>TU120256
TTACCAGGATCTTCCCTCGGTAATCATTACTGATGGTGATGGAGCTGTCGAAGACCTTGACTGTCACTACCTTGGCAAAGGACACTCGTGGGCTGCCACGGTTGTTGTTCTCCAGGGAGACATCGAAGGTCTGGAGGCTGGGATCCTTGGAGCAGACACCAACCAGCCTGTAGACACAGCTGCCCTGGAAGTCAAACTGCAGGCCATCAAAGCTGAGGAAGTGAGGGTCCCCCATGGCGCTACAGGTCTTGTAACTGATTGGATAACAGTCTTGGATGCCATCAACAACCATGCATTTCTCACCATCTTTGCATCCCCTCATCTGGCAGCTCACCCACTGTGTGGATTCCTCACAGGTACACAGCTCCTGACAGTTGCTGTCCGTCCAGAAGGTCTCCATAGGCATGTAGTAGTGATCCTTGTAGTTGCAGCCACAGCCTGTTTTCCTGGAGACACATTTGTTCCCACTGTAGACAAAACCTTCCTCACACTCACAGCCCTCTGTGCAGGGCAACTCACAGTGTCTGCCTGTAGGATTGGAGCACGTCGCTGGGCAGGGGTTTGCACAGAATTTGTAATGGCTGTTCTCTGGACAGTTCAGTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015230 True 828 mRNA 0.50 5 5394386 5410470
TU120256 False 603 lncRNA 0.52 2 5395893 5463028

Neighbor

gene id symbol gene type direction distance location
AMCG00015229 NA coding downstream 3045 5391018 ~ 5391341 (-)
AMCG00015232 NA coding downstream 3370 5388897 ~ 5391016 (-)
AMCG00015228 NA coding downstream 5510 5379521 ~ 5388876 (-)
AMCG00015231 NA coding downstream 34457 5358559 ~ 5359929 (-)
AMCG00015227 NA coding downstream 153351 5235132 ~ 5241035 (-)
AMCG00015233 NA coding upstream 46483 5509511 ~ 5514825 (-)
AMCG00015238 NA coding upstream 74317 5537345 ~ 5537795 (-)
AMCG00015239 NA coding upstream 74775 5537803 ~ 5540056 (-)
AMCG00015240 NA coding upstream 77636 5540664 ~ 5541483 (-)
AMCG00015243 NA coding upstream 228630 5691658 ~ 5694064 (-)
G96385 NA non-coding downstream 200248 5193823 ~ 5194138 (-)
G96375 NA non-coding downstream 237246 5156787 ~ 5157140 (-)
G96329 NA non-coding downstream 355895 5038290 ~ 5038491 (-)
G96318 LOC100846954 non-coding downstream 372321 5021260 ~ 5022065 (-)
G96314 NA non-coding downstream 377777 5016386 ~ 5016609 (-)
G96479 NA non-coding upstream 94223 5557251 ~ 5557505 (-)
G96531 NA non-coding upstream 323369 5786397 ~ 5788847 (-)
G96532 NA non-coding upstream 329375 5792403 ~ 5792614 (-)
G96609 NA non-coding upstream 464431 5927459 ~ 6032127 (-)
G96642 NA non-coding upstream 655593 6118621 ~ 6119653 (-)
AMCG00015211 NA other downstream 311199 4985572 ~ 5083187 (-)
AMCG00015210 NA other downstream 418036 4968050 ~ 4976350 (-)
AMCG00015203 NA other downstream 591482 4778393 ~ 4802904 (-)
G96191 NA other downstream 775122 4617711 ~ 4619264 (-)
G96094 NA other downstream 1213945 4174879 ~ 4180441 (-)
AMCG00015244 NA other upstream 290565 5753593 ~ 5757109 (-)
AMCG00015257 NA other upstream 562340 6025368 ~ 6072125 (-)
AMCG00015256 NA other upstream 586449 6049477 ~ 6064159 (-)
AMCG00015267 NA other upstream 905726 6368754 ~ 6384620 (-)
AMCG00015271 NA other upstream 947619 6410647 ~ 6419481 (-)

Expression


Co-expression Network