AMCG00015236


Basic Information

Item Value
gene id AMCG00015236
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 5560078 ~ 5570355 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015236
ATGCGGAAACCAATCTCAAAACTGAATTTGACAAAaaCTGAAGCTGCAGCTATGGGTGTGGAAGAGACGCTGCGCTTACTGGGGGCGACTCTGCTCCTCCTGCCTGgtgTGCTGGGTGGTACTCTGGTGGTGACGTATCCAGTGTCACAGATCTGTGCCCTGAGGGGCTCCTCTGTGCTCATACCCTGTACCTACGAATATCCTGACAATGCCACAGTGACAGAGAGGAAGTGGACGAATTTACCAAATAATAGTAACTGGGATGCCCCCCCCTTTGTTTATCACAGTAGAGGGGAACATCTTGACACTAACTACACAGGCAGAGTGCAGTATACTGAACAAGACAGGAGCTGCAACTTCAAGTTGACAGGTATAAGGAGCTCTGACAGCAGGAAATATTACTTCAGAATAACAATAGACAGACACCCAAAATCAGTCCTGGGTCTGAATGGAGTGAATCTCAGTGTTGCTGACAGTCCCTTGACAGttaaagtgaaaacaacaagatgcaaCCCAGTCATTCTAGAAGGAAACAATGTGACCCTGACCTGCAGCACACAGAGCTGCTCTCCCAACCAGACAGAGTTCACCTGGTTTAAGGATGGCCGGCCCATCTACAACACCACATCAAACACACTGAGCTTTAATAATGTTTCCTATGAACACTTTGGAAACTACTCCTGTGCTTCAAAAGACAATACAAGTGTACAGTCCCCACAGATCACTTTGAACGTTGAATGTGAGTCTacagatgaaaataatatttccaATTTAGAGGTTATCATGAGCCCATCAGGAGTGAATGGAGCAGTGAGAGAAGGGGACAGTGTGACCCTGACCTGTGAAGCACACAGCTGCTCTCCCACAGAGAGGGGGTTCAGCTGGTTTAAGAATGGCCAGCCCAtgtctcacacacagacaccaggCAACACACTGAGCTTTAACCATGTTTCCTATGGAGACTTTGAACACTACTCCTGTGCTTCCAAACACCTCACAGCCCATAAATCTGGAGTTTTCAAATTAGATGTCAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015236 True 1035 mRNA 0.47 5 5560078 5570355

Neighbor

gene id symbol gene type direction distance location
AMCG00015241 NA coding upstream 305 5549195 ~ 5559773 (+)
AMCG00015237 NA coding upstream 50381 5502465 ~ 5509697 (+)
AMCG00015225 NA coding upstream 83502 5471582 ~ 5476576 (+)
AMCG00015224 NA coding upstream 89204 5462752 ~ 5470874 (+)
AMCG00015222 NA coding upstream 113133 5445984 ~ 5446945 (+)
AMCG00015234 NA coding downstream 26691 5597046 ~ 5603355 (+)
AMCG00015235 NA coding downstream 110648 5681003 ~ 5682646 (+)
AMCG00015242 NA coding downstream 143350 5713705 ~ 5721665 (+)
AMCG00015246 NA coding downstream 202502 5772857 ~ 5788371 (+)
AMCG00015245 NA coding downstream 228138 5798493 ~ 5810929 (+)
G96424 NA non-coding upstream 101030 5457833 ~ 5459048 (+)
G96384 NA non-coding upstream 365899 5193972 ~ 5194179 (+)
G96326 NA non-coding upstream 523807 5036038 ~ 5036271 (+)
G96205 NA non-coding upstream 889903 4669472 ~ 4670175 (+)
G96204 NA non-coding upstream 890688 4668893 ~ 4669390 (+)
G96512 NA non-coding downstream 181813 5752168 ~ 5753255 (+)
G96513 NA non-coding downstream 184728 5755083 ~ 5755350 (+)
G96543 NA non-coding downstream 294689 5865044 ~ 5919123 (+)
G96568 NA non-coding downstream 454990 6025345 ~ 6067602 (+)
G96572 NA non-coding downstream 481043 6051398 ~ 6064774 (+)
G96420 NA other upstream 94644 5426879 ~ 5465434 (+)
G96415 NA other upstream 168355 5388937 ~ 5391723 (+)
AMCG00015215 NA other upstream 440677 5084574 ~ 5119401 (+)
AMCG00015212 NA other upstream 482175 5068047 ~ 5077903 (+)
G96317 LOC100846954,LOC107575789 other upstream 538026 5021366 ~ 5022052 (+)
AMCG00015277 NA other downstream 1115996 6686351 ~ 6691799 (+)
AMCG00015293 NA other downstream 1427242 6997597 ~ 7080788 (+)
G97006 NA other downstream 1845014 7415369 ~ 7415762 (+)
AMCG00015324 esrra,LOC107669367,LOC107715365,LOC104926321,LOC106534575 other downstream 2375853 7946208 ~ 7956114 (+)
AMCG00015334 NA other downstream 2503826 8074181 ~ 8078832 (+)

Expression


Co-expression Network