AMCG00015244


Basic Information

Item Value
gene id AMCG00015244
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 5753593 ~ 5757109 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015244
CGTCAGTCAAGGCGGAAGGCGGAAAGGTTGCTGGTGGAGAGCAGGAAATGCAGAGACAATGTAAACAGTGGCGACCGAACAGCGTGGGCTCTTTTGAACTGAAGGAGGCATCAAGTGAAATAAGACTAGTGCAACTGGAACAGCATGTGGCACCGCTGTGTTGGCCACTCATATATTTACAAACACCACAACGTCTGTCCTGTATGTTAAAAGCTGGGAGGAACACACAGAAGTTGGACTGGCCGGGTGTATTCTGGCCACACTTATAACGGACTGCCGTGACTTAAATGGGGGGGTTGTTTGCAATATACACAGCGCATAATTGCAGCGCATAACGTACATCCGGGACACTACAGTAAGGAATCACAGCAACCCCTCTTCTTGTGAAATCGGCTGTGCAGTcaggggttaaaaaaaagaagcatgggtcctgtgaaaaaaagaaagtccCTCAGTCTTGcggaaaaagtgaaaataatccATTCCCTTACCCGCGGGGAAAACACGCTagaggaggtggagagagagtaCAGCCTCCCGAGGACCAGCGTGTACTCCATACTGCGGAACCGGGCGAACACTCTCCGGCAGGTCGAGCGAGGCTGCGGCCGGGGGGCCAAGCGCGTCCGCAGGGCGGCGTTCGGCGAGGTGGACCGGGCGCTGCTGCAGTGGTACAGGGGGCCGCGATGCGAAAGCGCGCCGCTGACCTCCACGCTTCTGCGGGAGAAAGCCAAGCAGCTCGCCGCCACGTTGGGCTACGAGAAATTTCGTTGCAGTTTTGGTTGGCTTGAGAGCTGGAAGAAAAGGCACGACGTGACACTAAAGCCACCCAGAGGTGACCCCCACCAAGCAGAAGGCCCTGAGCACTGGGTGTTTGAGCTGGGCCCGGCGCAGGAGCCCCAGACTCCCAGAGGCCCCGGCAGCCCTGAGGCCTGTCAGCCAGCGCCCGCTCTCCTGCGTGGGCCTGTGTGCGGAGAGGCCAGCCTGGCCAccaaggaggaggaggaggcggtgCTGCAGTGTGAGCCGAGAGGAGAGCCCCCCTCCCACAGCGCCCCTGCGGCACACTGCCAGGAAGGGACGCCCTCTCTCTCGATTGGACGGGAGCAGGCTGCacacatggaaaacaaggacgcGCCGCTGCTCGCTGCCTTCGGGGCAGTGGGAGAAGACTCTGAGTTGCGGGCCCCCCTGGTTAAGAGGGAGGAGGATGGGGACTGCAGGGACCCTGTGGGGCCTCTGCACGGGGAGCCCAGCGCTCACTGCCATGGGTCAGCTGGGGTGAAACGGGAGAGCGAGGGCGTGCAGTGTGGGGCTGCCTGGGCTGCTGGGTCTGTGAGCTCCAGGGTAGCAGAGGGGGCAGCACTGCAGTACACAGCAGCCACCTcgtcctccagctcctcccagCGCAGACAGGGAAGTCTCTCGTCTGCGTTTcccagcacagccagcagctccctctctcctggCACTGGTTCCAGCGCCGACATGAAGATTCACGTTGCCTCTGCTCCTGGACAGCAGGATCAGCCTCCTGCGCTAAACCCCAGGGCCAGATCCAGCTCCAGACAGGCCGCACGCCCCCCTGAACTGAAAAACACAGTCCCCAACACCAGATACCCGCCGCACCTTCCTGAAGTGCACAATACAGCCTTCTCCTCTGACCCTAACTCCCACCCAGAGTCCCCCAGCGCATCGCCCCCTCCCACTGCCCCTGGCTCCAGGCTGACCCCCGTAGGACACAGCACAGCCTCCTTGCTCTCAAGCATCCTGGCTGGACAGCAGCAGACGCAACAGCTGCTCCAGCAGTCGGTGGACGTGTTGGCGGCCATGGGTGCTGCGCTGTCCTCCCTGGCCCGAGATGTGCACAGGTACGTGGATCACATCTCCACCAGGGCTGCAAATGCTCCCGCCACTGGGATCCCAGCATGCACTTCTGTGGCTGCCCACCGAGATGCACCACTTCCTACACTCCCTATACCAACCAATGACACCTATAGCACCCCAACTCACTCCATCCACAACCCGGGCGTGGAACGGAGAGCTTGCTGGAATGGGGAATTATAG
>TU120336
TTCGGGATTCTGATTGGGTATTCGTGTTTTATTTTCGTAGAGCTGGAAGATGGTTGGCTTGCCACCACGTCAGTCAAGGCGGAAGGCGGAAAGGTTGCTGGTGGAGAGCAGGAAATGCAGAGACAATGTAAACAGTGGCGACCGAACAGCGTGGGCTCTTTTGAACTGAAGGAGGCATCAAGTGAAATAAGACTAGTGCAACTGGAACAGCATGTGGCACCGCTGTGTTGGCCACTCATATATTTACAAACACCACAACGTCTGTCCTGTATGTTAAAAGCTGGGAGGAACACACAGAAGTTGGACTGGCCGGGTGTATTCTGGCCACACTTATAACGGACTGCCGTGACTTAAATGGGGGGGTTGTTTGCAATATACACAGCGCATAATTGCAGCGCATAACGTACATCCGGGACACTACAGTAAGGAATCACAGCAACCCCTCTTCTTGTGAAATCGGCTGTGCAGTcaggggttaaaaaaaagaagcatgggtcctgtgaaaaaaagaaagtccCTCAGTCTTGcggaaaaagtgaaaataatccATTCCCTTACCCGCGGGGAAAACACGCTagaggaggtggagagagagtaCAGCCTCCCGAGGACCAGCGTGTACTCCATACTGCGGAACCGGGCGAACACTCTCCGGCAGGTCGAGCGAGGCTGCGGCCGGGGGGCCAAGCGCGTCCGCAGGGCGGCGTTCGGCGAGGTGGACCGGGCGCTGCTGCAGTGGTACAGGGGGCCGCGATGCGAAAGCGCGCCGCTGACCTCCACGCTTCTGCGGGAGAAAGCCAAGCAGCTCGCCGCCACGTTGGGCTACGAGAAATTTCGTTGCAGTTTTGGTTGGCTTGAGAGCTGGAAGAAAAGGCACGACGTGACACTAAAGCCACCCAGAGGTGACCCCCACCAAGCAGAAGGCCCTGAGCACTGGGTGTTTGAGCTGGGCCCGGCGCAGGAGCCCCAGACTCCCAGAGGCCCCGGCAGCCCTGAGGCCTGTCAGCCAGCGCCCGCTCTCCTGCGTGGGCCTGTGTGCGGAGAGGCCAGCCTGGCCAccaaggaggaggaggaggcggtgCTGCAGTGTGAGCCGAGAGGAGAGCCCCCCTCCCACAGCGCCCCTGCGGCACACTGCCAGGAAGG

Function

GO:

id name namespace
GO:0061982 meiosis I cell cycle process biological_process
GO:0090304 nucleic acid metabolic process biological_process
GO:0051321 meiotic cell cycle biological_process
GO:1903046 meiotic cell cycle process biological_process
GO:0006259 DNA metabolic process biological_process
GO:0006260 DNA replication biological_process
GO:0006261 DNA-dependent DNA replication biological_process
GO:0006269 DNA replication, synthesis of RNA primer biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015244 True 2067 mRNA 0.61 4 5753593 5757042
TU120336 False 1146 TUCP 0.58 2 5755654 5757109

Neighbor

gene id symbol gene type direction distance location
AMCG00015243 NA coding downstream 59529 5691658 ~ 5694064 (-)
AMCG00015240 NA coding downstream 212110 5540664 ~ 5541483 (-)
AMCG00015239 NA coding downstream 213537 5537803 ~ 5540056 (-)
AMCG00015238 NA coding downstream 215798 5537345 ~ 5537795 (-)
AMCG00015233 NA coding downstream 238768 5509511 ~ 5514825 (-)
AMCG00015249 NA coding upstream 52925 5810034 ~ 5826236 (-)
AMCG00015248 NA coding upstream 71639 5828748 ~ 5843272 (-)
AMCG00015250 NA coding upstream 88067 5845176 ~ 5849429 (-)
AMCG00015247 NA coding upstream 107935 5865044 ~ 5880190 (-)
AMCG00015251 NA coding upstream 143485 5900594 ~ 5913937 (-)
G96452 NA non-coding downstream 193994 5398094 ~ 5559599 (-)
G96479 NA non-coding downstream 196088 5557251 ~ 5557505 (-)
G96462 NA non-coding downstream 288269 5432605 ~ 5465324 (-)
G96459 NA non-coding downstream 288926 5427736 ~ 5464667 (-)
G96458 NA non-coding downstream 289737 5426879 ~ 5463856 (-)
G96531 NA non-coding upstream 29288 5786397 ~ 5788847 (-)
G96532 NA non-coding upstream 35294 5792403 ~ 5792614 (-)
G96609 NA non-coding upstream 170350 5927459 ~ 6032127 (-)
G96642 NA non-coding upstream 361512 6118621 ~ 6119653 (-)
G96643 NA non-coding upstream 363545 6120654 ~ 6121002 (-)
AMCG00015230 NA other downstream 290565 5394386 ~ 5463028 (-)
AMCG00015211 NA other downstream 670406 4985572 ~ 5083187 (-)
AMCG00015210 NA other downstream 777243 4968050 ~ 4976350 (-)
AMCG00015203 NA other downstream 950689 4778393 ~ 4802904 (-)
G96191 NA other downstream 1134329 4617711 ~ 4619264 (-)
AMCG00015257 NA other upstream 268259 6025368 ~ 6072125 (-)
AMCG00015256 NA other upstream 292368 6049477 ~ 6064159 (-)
AMCG00015267 NA other upstream 611645 6368754 ~ 6384620 (-)
AMCG00015271 NA other upstream 653538 6410647 ~ 6419481 (-)
G96766 NA other upstream 941748 6698857 ~ 6700357 (-)

Expression


Co-expression Network