AMCG00015252


Basic Information

Item Value
gene id AMCG00015252
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 5959682 ~ 5972115 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015252
TAGTGTGGAGGTGATCTCTGGCTTTGTTCGGTAGCAGGTTGTGGTGCAGACGGAAAGCTACATGaccctgagagagagcgagagagagagagagagactaatgTGACTAACACAGTCCAATCGCTACACCAGATACAGCCCTACTCTCCCCTGAGGATGAGCAAGCCATATCCTTACCCAACGGACCCCAGTGGCAACCCCAGCGCACCCCCTCAAGGATGGAACCCGGAAAACAAGGCCGGGATGGGGTACCCCCCTCCTCCAGCTTACCAGGACAACCCCGCCCAGCCTGGGATGGGATATGCGCAGCCCCCTCAGTATGGAGGGGTACCTTACCCCCAGCCCGGACAGCCGTACGGTCAGCCAGGACAACCAGGACAACCAGGACAGCCATACCCCCCGGGCCAATACACCATGGCCCCCCAGGGAGGGATTGTCACCATGCAACCCACCATTTTTGTCACCCGGACACCACTGCAACACCCACTGCCTGACTACTTGGGGTACTCCATCTTCACCTTGCTGTGCTGTTGTCTGCCCCTGGGGATAGCTGCATTAATCTACTCCATATCGACCCGTGATGCCAACAATCAAGGGAACCAGGAGGCGGCCCAGAAGAGCTCTCGCTTGGCCCGCAACCTCAACCACGCGGCCCTGGGCATCGGGATCGCTGTGCTCGTGCTGTGGATAGTCTACGTATCTGTGGTCCTCAGCTCCTATGATTGAGCTGCCTCTCGCTCTGCCACCCATGCTCGCTTAACTGCCTTAATGGCTTCTAACATGAAACACCCCCACTCCCATCCTATTCCAAGGTCTCTgtgtgcttttttccccccactgccaaTTAATCTGGCTGAGCAATGCCATTAATTGCCTGGGGTGGAAAGGTCAGAGGGTGTCACTGATCCATTCTTAGAGAAagataactatatatatatatatatatatatatatagtgctgtAGTACTGttctaacacacacacccctcctcctcctccccctctctccctatATATCTCCTCTTGTTTGTCAAATGGTGTGCTTGCCACAAGTGTTCCTTATTGCAAGAGATTGTTGTTTAATCATTAATATTCTTCATGTTTGTATAATTATTGGAATCTCCAAAGTAATTATGTTTAGATACAGATCTGTTCTTTTCTcttaattattactttattttttaaatgtgtctattCCAGATGACACAAAACACTGATTTTGCTTCTCGCAACAGCAGGTAGAGAATACAAGTGAAAAAACAATGCAGAGATCCCCACAGCACAGTCCATTACAAAACAGAGCGATATTCCACAGTCCTATTAATAGAACTGCAAAGCAACACAAGTGttaaatacagtgcaaatactagagtacaatacaacacaactcCATGCAAAGCTgcacaatacaatgcaattggACACAGTACAATTTAACACATCacaacacaattaaacagtGTTGGAAGCATGCAGCATGTAGTAACAGTACAAGCAAGTTGAAGTCATTCAAGCAGGGCAGAATACAGACCCCAATGGATCAAACCTGCCTGTCCTGACCAGCCACCAGAGCACATCTAGACCCCTTAGTATAATGGCATCTAGCAGCTTTAGAAGCCAAGCAATGTGGAAAACAGATAAAAAGACCCAAGTGAAGAGTAGAGATGTCTTGACCAATTCTTTCTGCCAGGCTGACTGTTGGGAAACcttctcctttgtcttctgtgcTCCTACACCACAGTGCAGAGATCTCACCGCATCAGTgaaaggcccaggcctcttagcgAGGCTCGAGATCACTGCACTACCCTCTGCTCACTACACTATAATCTGTATAtggtaaatatacaaatattgcctgcctttctttctgtgaaCTCCAGCTTTACTAATGTCAActacaagcaaaaaaaaatatgtacaaatagAAGTACATCCATGCATTACTGGAAATACCAAATGTTGcgattttacaaata

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015252 True 1979 mRNA 0.47 3 5959682 5972115

Neighbor

gene id symbol gene type direction distance location
AMCG00015245 NA coding upstream 148753 5798493 ~ 5810929 (+)
AMCG00015246 NA coding upstream 171311 5772857 ~ 5788371 (+)
AMCG00015242 NA coding upstream 238017 5713705 ~ 5721665 (+)
AMCG00015235 NA coding upstream 277036 5681003 ~ 5682646 (+)
AMCG00015234 NA coding upstream 356327 5597046 ~ 5603355 (+)
AMCG00015255 NA coding downstream 33192 6005307 ~ 6018242 (+)
AMCG00015253 gapdhs,LOC107577408,LOC107709572,LOC107686531 coding downstream 55710 6027825 ~ 6035491 (+)
AMCG00015254 tmem147,LOC106605633 coding downstream 67393 6039508 ~ 6046676 (+)
AMCG00015262 NA coding downstream 172696 6144811 ~ 6157310 (+)
AMCG00015264 NA coding downstream 277047 6249162 ~ 6257319 (+)
G96543 NA non-coding upstream 40559 5865044 ~ 5919123 (+)
G96513 NA non-coding upstream 204332 5755083 ~ 5755350 (+)
G96512 NA non-coding upstream 206427 5752168 ~ 5753255 (+)
G96424 NA non-coding upstream 500634 5457833 ~ 5459048 (+)
G96384 NA non-coding upstream 765503 5193972 ~ 5194179 (+)
G96568 NA non-coding downstream 53230 6025345 ~ 6067602 (+)
G96572 NA non-coding downstream 79283 6051398 ~ 6064774 (+)
G96591 NA non-coding downstream 145500 6117615 ~ 6118160 (+)
G96668 NA non-coding downstream 299222 6271337 ~ 6273388 (+)
G96671 NA non-coding downstream 303253 6275368 ~ 6275601 (+)
G96420 NA other upstream 494248 5426879 ~ 5465434 (+)
G96415 NA other upstream 567959 5388937 ~ 5391723 (+)
AMCG00015215 NA other upstream 840281 5084574 ~ 5119401 (+)
AMCG00015212 NA other upstream 881779 5068047 ~ 5077903 (+)
G96317 LOC100846954,LOC107575789 other upstream 937630 5021366 ~ 5022052 (+)
AMCG00015277 NA other downstream 714236 6686351 ~ 6691799 (+)
AMCG00015293 NA other downstream 1025482 6997597 ~ 7080788 (+)
G97006 NA other downstream 1443254 7415369 ~ 7415762 (+)
AMCG00015324 esrra,LOC107669367,LOC107715365,LOC104926321,LOC106534575 other downstream 1974093 7946208 ~ 7956114 (+)
AMCG00015334 NA other downstream 2102066 8074181 ~ 8078832 (+)

Expression


Co-expression Network