AMCG00015256


Basic Information

Item Value
gene id AMCG00015256
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 6049477 ~ 6064159 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015256
aaaaaaatcccGTCTTTTTCTGGATCTGAGGTAAGTGCTGGTCGTCGCTGTAAACGAGCGTTTCTCCACAATGCCAaatctgtgtgcgtgtgtgcggatggatggatggatggatggacggacggacggacggacggatggatggatggatgtgtaTTTATCTAACTACTCCCCTCAAGTGTGTGTCCCGGTCCTGTAGTGTGTCGTGTGCGTGGAGTCGTTCAGCCCGCAGTCAGTGGCGCTGATGGCGCTGGTCATAAACACGACGCGACTTCCACGCGTTTCAGGCCGAGTTGATGATTAAACTCATTTCCTCACAGGCAGCAGCTGTTGATCGTCTCCGCTTGGAGCTGAAATACTTCtgtatctttgtgtgtgtgttttttttttttttacttctggtCGGTGtcgtgtttgtgttgtgtttttggggCGTACTTCGAGATATCGTGATTATTTTGCCAGGGAGAGATTGCGTCACTTGCGTCAAAATACAGTAGTTTGTTTTCcgtttgtttttgctgtgtaaACTGTTGTCCGTGCGAGGAAGTGGAGCATTTGTTGGAAGTAATACTAATAAAGTAGGTCGAAGCTGTAAAGATGGCAAAGATCAGCGCCTTGGTTCTCCTCACAGTTTTTTCGTTCGCCTTGGCAGAGCAAGAAGaagaGGAGGATCCTTTTACCTTTGATTATTACAAGTTGCGAGTGGGAGGTCTGATCctgtctgctgtgctgtgtgtgatcGGCATCACCATCCTGCTCAGTGGACACTGCCGCTGCAAGTTCAAGCAGGACAAGAGGTATGCAATTCACATCCTTCAGCACAAACACCAAGAGGATGTGCCTGTAGAGGAGGAGCGGGAGCTCAGCGGCCACCGCACAGCAGCTGCTCAGCACTCCAGctCGGGCGAGCGAGTGCTGAGAAGGGAAGTGGAGGTCATGTGACACACCTGTTCAGTCCTTGTTGCCTTAGCGATGGAGAGGATCGGAGGTGGTGTAAGGAGGGTGGGGGTTAGAAATCACCCGTGTCATTGGCTGTGTTGGCATGCTGGCAAATAAGTCAGAGGCTGTGTCATGACTTCTCTGTCTGGTTACAGTTTTAATAGTTTGGTTTATATTTGAAtagtgtttatgtttttaaagcaacacaacaaaacatgtgGTCCAAAGCAGGATTTGTTACATTAACAGAACTAAGGCAAAACCTTACACATTGCCATTCCACCTTAAGAGTAGTCCTGAGCCTTCCTGTACTCTCATGACTTTTGACCAGCATGTCAACACAGCCAATGTGGGTCTTCTCACACTGGGGGGGAGGGGCTACGTGTCTGTAATTCCACTCTCGCTTGCCTCTGTCTGTAATGGCCACCCCTACCACTGGAGTCAGTGGCACACAGTCTGTCATTGTTAAAGCAAGACtctgtgattttgtttatatttaaactggTACCCAAGTGAGCTTGACGTCATTGTACCCATTGCCATCTGCTGTGCTTTAAGCTCCACCCCCCAGTTACAGTTTACCCTGTTTCATGTTGAAgtagcatgtttgtttttagatttggttttgttttatgggTTAATGTAACatgttactaaataaataaataaataaataaataatcaaatcaa
>TU120487
TTGAGCGCCTTGTGTCGGGACAGGGTGTCGGCATTTGCCTAAGTCAATAGGTGACTTTTATACCGGGCTGTTCGGCTCTTCCTGCTTatatcccccccccaaaaaaatcccGTCTTTTTCTGGATCTGAGTAGGTCGAAGCTGTAAAGATGGCAAAGATCAGCGCCTTGGTTCTCCTCACAGTTTTTTCGTTCGCCTTGGCAGAGCAAGAAGaagaGGAGGATCCTTTTACCTTTGATTATTACAAGTTGCGAGTGGGAGGTCTGATCctgtctgctgtgctgtgtgtgatcGGCATCACCATCCTGCTCAGTGGACACTGCCGCTGCAAGTTCAAGCAGGACAAGAGGAGGAGGAGCGGGAGCTCAGCGGCCACCGCACAGCAGCTGCTCAGCACTCCAGctCGGGCGAGCGAGTGCTGAGAAGGGAAGTGGAGGTCATGTGACACACCTGTTCAGTCCTTGTTGCCTTAGCGATGGAGAGGATCGGAGGTGGTGTAAGGAGGGTGGGGGTTAGAAATCACCCGTGTCATTGGCTGTGTTGGCATGCTGGCAAATAAGTCAGAGGCTGTGTCATGACTTCTCTGTCTGGTTACAGTTTTAATAGTTTGGTTTATATTTGAAtagtgtttatgtttttaaagcaacacaacaaaacatgtgGTCCAAAGCAGGATTTGTTACATTAACAGAACTAAGGCAAAACCTTACACATTGCCATTCCACCTTAAGAGTAGTCCTGAGCCTTCCTGTACTCTCATGACTTTTGACCAGCATGTCAACACAGCCAATGTGGGTCTTCTCACACTGGGGGGGAGGGGCTACGTGTCTGTAATTCCACTCTCGCTTGCCTCTGTCTGTAATGGCCACCCCTACCACTGGAGTCAGTGGCACACAGTCTGTCATTGTTAAAGCAAGACtctgtgattttgtttatatttaaactggTACCCAAGTGAGCTTGACGTCATTGTACCCATTGCCATCTGCTGTGCTTTAAGCTCCACCCCCCAGTTACAGTTTACCCTGTTTCATGTTGAAgtagcatgtttgtttttagatttggttttgttttatgggTTAATGTAACatgttactaaataaataaataaataaataaataatcaaatcaagGAGTCTGAAGACCAATTTCCTGTGCTTCCTGTGGGTAACAGTCAGA

Function

GO:

id name namespace
GO:0034220 ion transmembrane transport biological_process
GO:0016020 membrane cellular_component
GO:0005216 ion channel activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015256 True 1632 mRNA 0.46 8 6049524 6064059
TU120487 False 1178 TUCP 0.47 8 6049477 6064159

Neighbor

gene id symbol gene type direction distance location
AMCG00015258 NA coding downstream 41233 5975211 ~ 6008244 (-)
AMCG00015251 NA coding downstream 135540 5900594 ~ 5913937 (-)
AMCG00015247 NA coding downstream 169287 5865044 ~ 5880190 (-)
AMCG00015250 NA coding downstream 200048 5845176 ~ 5849429 (-)
AMCG00015248 NA coding downstream 206205 5828748 ~ 5843272 (-)
AMCG00015260 NA coding upstream 14064 6078223 ~ 6083491 (-)
AMCG00015259 NA coding upstream 20718 6084877 ~ 6097018 (-)
AMCG00015261 NA coding upstream 59941 6124100 ~ 6144724 (-)
AMCG00015270 dyrk1b,LOC106605641,LOC106578455,LOC107685988,LOC107737818,LOC107666783 coding upstream 366459 6430618 ~ 6440642 (-)
AMCG00015272 fbl,LOC107719117,LOC107666874,LOC102785674,LOC107737817 coding upstream 424283 6488442 ~ 6501219 (-)
G96609 NA non-coding downstream 17350 5927459 ~ 6032127 (-)
G96532 NA non-coding downstream 256863 5792403 ~ 5792614 (-)
G96531 NA non-coding downstream 260630 5786397 ~ 5788847 (-)
G96479 NA non-coding downstream 491972 5557251 ~ 5557505 (-)
G96462 NA non-coding downstream 584153 5432605 ~ 5465324 (-)
G96642 NA non-coding upstream 54462 6118621 ~ 6119653 (-)
G96643 NA non-coding upstream 56495 6120654 ~ 6121002 (-)
G96650 NA non-coding upstream 92944 6157103 ~ 6223629 (-)
G96653 NA non-coding upstream 164355 6228514 ~ 6228776 (-)
G96696 NA non-coding upstream 290861 6355020 ~ 6362409 (-)
AMCG00015244 NA other downstream 292368 5753593 ~ 5757109 (-)
AMCG00015230 NA other downstream 586449 5394386 ~ 5463028 (-)
AMCG00015211 NA other downstream 966290 4985572 ~ 5083187 (-)
AMCG00015210 NA other downstream 1073127 4968050 ~ 4976350 (-)
AMCG00015203 NA other downstream 1246573 4778393 ~ 4802904 (-)
AMCG00015267 NA other upstream 304595 6368754 ~ 6384620 (-)
AMCG00015271 NA other upstream 346488 6410647 ~ 6419481 (-)
G96766 NA other upstream 634698 6698857 ~ 6700357 (-)
AMCG00015283 NA other upstream 806303 6870462 ~ 6877734 (-)
AMCG00015285 NA other upstream 827076 6891235 ~ 6896427 (-)

Expression


Co-expression Network