AMCG00015257


Basic Information

Item Value
gene id AMCG00015257
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 6025368 ~ 6072125 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015257
tttatgtgtgtgtgagagcaggAGAAAGTCTGGCCTTTGACTAACCAGAGAGTTGCCGGAGCTGCTGTGTTGTGCCTGTCAACAAAGGGGAGGTGACTGGCTTTCTAGAAGGGACAAAGTAAAACCTTTATGCTGTCTTGAGTTCCTGCTCAGGTTCTTTTTGCACCTGCATCTGAGTGTCTTCCTGTGAGCTGGTCTCTGCCCAGTCAGCTTTTACACACCATGTCTCAGCTCAGCATTCTACTTCTGTTGACAGTCTTATCAACATACTGCACAGAAGTGACAGCAAACTGGGATAGGCTGCGCATCGGTGGATTGGTCttctttgttatattttttgtttgtggagTAGTGGTTCTTTTTTAAAAGCTGGCAAATGAGCTAAATCCAACCGGACTGATTCTGATTCGCTGTCGCCACAGGGACAAAGATGGGAACGGTGGTGGGGTTTGGTATGGAGGGTGGGGCGCAAATAGAATCAGCTCTTTCCATTGGAAGCTGTTCTGTCAGGGAGGGGTCTTTCTCTCAGGCCCCACCCTCTCCCAGCCACACTGGATATTGACCAGGATTCTCCCTTTCTAATGGTTTCAAATTTATGAACTCagcaattaattttgtttataatgaGAAATGAATGTCCAATAAAGACGAACGAAGTGTCATGCCCAA
>TU120468
AGAGAGTTGCCGGAGCTGCTGTGTTGTGCCTGTCAACAAAGGGGAGGTGACTGGCTTTCTAGAAGGGACAAAGTAAAACCTTTATGCTGTCTTGAGTTCCTGCTCAGGTTCTTTTTGCACCTGCATCTGAGTGTCTTCCTGTGAGCTGGTCTCTGCCCAGTCAGCTTTTACACACCATGTCTCAGCTCAGCATTCTACTTCTGTTGACAGTCTTATCAACATACTGCACAGAAGTGACAGCAAATGCTTTTACGTATGGGGACTCGTGCAAATGGGGTGGGAAAAAAGCTGGCAAATGAGCTAAATCCAACCGGACTGATTCTGATTCGCTGTCGCCACAGGGACAAAGATGGGAACGGTGGTGGGGTTTGGTATGGAGGGTGGGGCGCAAATAGAATCAGCTCTTTCCATTGGAAGCTGTTCTGTCAGGGAGGGGTCTTTCTCTCAGGCCCCACCCTCTCCCAGCCACACTGGATATTGACCAGGATTCTCCCTTTCTAATGGTTTCAAATTTATGAACTCagcaattaattttgtttataatgaGAAATGAATGTCCAATAAAGACGAACGAAGTGTCATGCCCAACTTG
>TU120469
AGAGAGTTGCCGGAGCTGCTGTGTTGTGCCTGTCAACAAAGGGGAGGTGACTGGCTTTCTAGAAGGGACAAAGTAAAACCTTTATGCTGTCTTGAGTTCCTGCTCAGGTTCTTTTTGCACCTGCATCTGAGTGTCTTCCTGTGAGCTGGTCTCTGCCCAGTCAGCTTTTACACACCATGTCTCAGCTCAGCATTCTACTTCTGTTGACAGTCTTATCAACATACTGCACAGAAGTGACAGCAAATGCTTTTACGTATGGGGACTCGTGCAAATGGGGTGGGAAAAAAGCTGGCAAATGAGCTAAATCCAACCGGACTGATTCTGATTCGCTGTCGCCACAGGGACAAAGATGGGAACGGTGGTGGGGTTTGGTATGGAGGGTGGGGCGCAAATAGAATCAGCTCTTTCCATTGGAAGCTGTTCTGTCAGGGAGGGGTCTTTCTCTCAGGCCCCACCCTCTCCCAGCCACACTGGATATTGACCAGGATTCTCCCTTTCTAATGGTTTCAAATTTATGAACTCagcaattaattttgtttataatgaGAAATGAATGTCCAATAAAGACGAACGAAGTGTCATGCCCAAaaaaaaaaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015257 True 669 mRNA 0.46 5 6064969 6072125
TU120468 False 592 lncRNA 0.47 6 6064965 6072079
TU120469 False 598 lncRNA 0.46 7 6025368 6072079

Neighbor

gene id symbol gene type direction distance location
AMCG00015258 NA coding downstream 17124 5975211 ~ 6008244 (-)
AMCG00015251 NA coding downstream 111431 5900594 ~ 5913937 (-)
AMCG00015247 NA coding downstream 145178 5865044 ~ 5880190 (-)
AMCG00015250 NA coding downstream 175939 5845176 ~ 5849429 (-)
AMCG00015248 NA coding downstream 182096 5828748 ~ 5843272 (-)
AMCG00015260 NA coding upstream 6098 6078223 ~ 6083491 (-)
AMCG00015259 NA coding upstream 12752 6084877 ~ 6097018 (-)
AMCG00015261 NA coding upstream 51975 6124100 ~ 6144724 (-)
AMCG00015270 dyrk1b,LOC106605641,LOC106578455,LOC107685988,LOC107737818,LOC107666783 coding upstream 358493 6430618 ~ 6440642 (-)
AMCG00015272 fbl,LOC107719117,LOC107666874,LOC102785674,LOC107737817 coding upstream 416317 6488442 ~ 6501219 (-)
G96532 NA non-coding downstream 232754 5792403 ~ 5792614 (-)
G96531 NA non-coding downstream 236521 5786397 ~ 5788847 (-)
G96452 NA non-coding downstream 465769 5398094 ~ 5559599 (-)
G96479 NA non-coding downstream 467863 5557251 ~ 5557505 (-)
G96462 NA non-coding downstream 560044 5432605 ~ 5465324 (-)
G96642 NA non-coding upstream 46496 6118621 ~ 6119653 (-)
G96643 NA non-coding upstream 48529 6120654 ~ 6121002 (-)
G96650 NA non-coding upstream 84978 6157103 ~ 6223629 (-)
G96653 NA non-coding upstream 156389 6228514 ~ 6228776 (-)
G96696 NA non-coding upstream 282895 6355020 ~ 6362409 (-)
AMCG00015244 NA other downstream 268259 5753593 ~ 5757109 (-)
AMCG00015230 NA other downstream 562340 5394386 ~ 5463028 (-)
AMCG00015211 NA other downstream 942181 4985572 ~ 5083187 (-)
AMCG00015210 NA other downstream 1049018 4968050 ~ 4976350 (-)
AMCG00015203 NA other downstream 1222464 4778393 ~ 4802904 (-)
AMCG00015267 NA other upstream 296629 6368754 ~ 6384620 (-)
AMCG00015271 NA other upstream 338522 6410647 ~ 6419481 (-)
G96766 NA other upstream 626732 6698857 ~ 6700357 (-)
AMCG00015283 NA other upstream 798337 6870462 ~ 6877734 (-)
AMCG00015285 NA other upstream 819110 6891235 ~ 6896427 (-)

Expression


Co-expression Network