AMCG00015267


Basic Information

Item Value
gene id AMCG00015267
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 6368754 ~ 6384620 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015267
ATGTCAACTGTAACACTGTCTGCTGCAGTAGGGCTGCCCAGCTCCCCCGTGGTGGTGGTTCCAGGCAGTGACGTCACCCTCAGTTGCTCTTTCCACTATAGTGAAGCTGATGACCCTGGCAGAGTGGTGCTGACCTGGCAGCGAGGTCATGAGGTTGTGCACAGTTTCTATTACGGCACAGATCAGCTGAAGGAACAAAGCCCCGCCTACAGGGGGCGCACACAGGTGTTCCCAGAGCAGGTGGCCGTGGGTAACGCCTCTCTGAGGCTGAGAGACGTGCAGGGAAGTGACCAGGGCACCTACACCTGTGCTGTGGCCAATGAACAAGGAAGCAGCCAGAGAGACCTGCAGATCCTAGTGGCAGCGGAATACGAAGAGCCTTGTTTAGTGATCAGCATGTCTAAGCATCCTGGCCTCCTCATGCTGGAGTACTGTGCTCAGGGATACCCGCAGGCCACTGTGCTCTGGCTGAACCAATCTGGAGGTGACATCACGGAGCGCAGCCACACCAGCCAATGGGAGAGCAGGGGAGGGTTGCTGGAGCTGTGCAGCCGTCTGACAGTGGAACAACTGGCCAATCAGAGCTACACCTTCCAGCTGAGCAACCCTGTGGTCAATCAAACCGTCAGGAGGATTGTGGCCATAGCCAGCGGAGGCAAGCCTCGTTTAGAGTTTGGAATAACTGCAGCCTGTAGGCCAATCATCATCACCCTTGTCTCTTCTGAGGGCTTTCCACAGCCCACCCTGGTGTGGGGGAACATGACCGGAAGTGACATCACCAATCAGAGCTGCACCACTATGCTCCTGGACAGCCGGGGGTGCTACAAAGTGCAGAGTGTACTGTCAGTGACTccgactcacacacacaatctcactGTGCAGCTCATACTCGCCGTTCTCAACCAGAATCTCAGTCGCTCCATCATGCTTCACCCACAGGATGTGGTGTGA
>TU120625
TTCCAGATTCAACGCCAAAGATGAACCCAGACCGCCAGCAACTCGCTCCCCGGTTTATTTCTTCctgtattaattgtatgtatcACGACAGCGAATCCTCAGACAACATTCATCCAGGGCGCCCAAATATCACGTCATCGATAGGCGCACACGAATGGCCTCTTTCCGCAATTCttggctccaccaatgggatgtCTCTAATTCTGTAGCACTTTAGCCGGCTCAAGCATGTGGTCTGTCTTTAACGTGTCGCCAGCGTAAGGTGGATGTGTCTGCTGCAGTAGGGCTGCCCAGCTCCCCCGTGGTGGTGGTTCCAGGCAGTGACGTCACCCTCAGTTGCTCTTTCCACTATAGTGAAGCTGATGACCCTGGCAGAGTGGTGCTGACCTGGCAGCGAGGTCATGAGGTTGTGCACAGTTTCTATTACGGCACAGATCAGCTGAAGGAACAAAGCCCCGCCTACAGGGGGCGCACACAGGTGTTCCCAGAGCAGGTGGCCGTGGGTAACGCCTCTCTGAGGCTGAGAGACGTGCAGGGAAGTGACCAGGGCACCTACACCTGTGCTGTGGCCAATGAACAAGGAAGCAGCCAGAGAGACCTGCAGATCCTAGTGGCAGCGGAATACGAAGAGCCTTGTTTAGTGATCAGCATGTCTAAGCATCCTGGCCTCCTCATGCTGGAGTACTGTGCTCAGGGATACCCGCAGGCCACTGTGCTCTGGCTGAACCAATCTGGAGGTGACATCACGGAGCGCAGCCACACCAGCCAATGGGAGAGCAGGGGAGGGTTGCTGGAGCTGTGCAGCCGTCTGACAGTGGAACAACTGGCCAATCAGAGCTACACCTTCCAGCTGAGCAACCCTGTGGTCAATCAAACCGTCAGGAGGATTGTGGCCATAGCCAGCGGAGTTGCTGTATTGGCCAACATCTCTGAAATAGTTTGACATGTGGAACAGATTGACCTGTAGTCCAGTCCATGACTGACAACATTCAACTCCAGAGTGGATCATAAAGCTGTCTGTGCATCTGAAGCAAGATCATATCTGTGtgatctgctgctgctgctgctgctgctgctgctggccgGCCTAATTCAGTGACCCACAGAATGGAGAAGGCAGAGtaatacagaataaaatgaTAATTGCAATGGATTACTATTACTGGGAGTCCAATGTGctttgtctgttg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015267 False 951 mRNA 0.56 5 6368754 6382439
TU120625 True 1190 TUCP 0.53 5 6377890 6384620

Neighbor

gene id symbol gene type direction distance location
AMCG00015261 NA coding downstream 224030 6124100 ~ 6144724 (-)
AMCG00015259 NA coding downstream 271736 6084877 ~ 6097018 (-)
AMCG00015260 NA coding downstream 285263 6078223 ~ 6083491 (-)
AMCG00015258 NA coding downstream 360510 5975211 ~ 6008244 (-)
AMCG00015251 NA coding downstream 454817 5900594 ~ 5913937 (-)
AMCG00015270 dyrk1b,LOC106605641,LOC106578455,LOC107685988,LOC107737818,LOC107666783 coding upstream 45998 6430618 ~ 6440642 (-)
AMCG00015272 fbl,LOC107719117,LOC107666874,LOC102785674,LOC107737817 coding upstream 103822 6488442 ~ 6501219 (-)
AMCG00015273 LOC108437392,LOC105891768,LOC107719116,LOC107737835,LOC108256255,LOC107666762 coding upstream 130746 6515366 ~ 6525807 (-)
AMCG00015275 NA coding upstream 205573 6590193 ~ 6591000 (-)
AMCG00015274 NA coding upstream 223429 6608049 ~ 6609427 (-)
G96696 NA non-coding downstream 6345 6355020 ~ 6362409 (-)
G96653 NA non-coding downstream 139978 6228514 ~ 6228776 (-)
G96650 NA non-coding downstream 145125 6157103 ~ 6223629 (-)
G96643 NA non-coding downstream 247752 6120654 ~ 6121002 (-)
G96642 NA non-coding downstream 249101 6118621 ~ 6119653 (-)
G96873 NA non-coding upstream 602780 6987400 ~ 7063937 (-)
G96967 NA non-coding upstream 888291 7272911 ~ 7277373 (-)
G96984 NA non-coding upstream 951395 7336015 ~ 7337227 (-)
G96988 NA non-coding upstream 965889 7350509 ~ 7350785 (-)
G96994 NA non-coding upstream 977765 7362385 ~ 7364999 (-)
AMCG00015257 NA other downstream 296629 6025368 ~ 6072125 (-)
AMCG00015256 NA other downstream 304595 6049477 ~ 6064159 (-)
AMCG00015244 NA other downstream 611645 5753593 ~ 5757109 (-)
AMCG00015230 NA other downstream 905726 5394386 ~ 5463028 (-)
AMCG00015211 NA other downstream 1285567 4985572 ~ 5083187 (-)
AMCG00015271 NA other upstream 26027 6410647 ~ 6419481 (-)
G96766 NA other upstream 314237 6698857 ~ 6700357 (-)
AMCG00015283 NA other upstream 485842 6870462 ~ 6877734 (-)
AMCG00015285 NA other upstream 506615 6891235 ~ 6896427 (-)
AMCG00015288 NA other upstream 533059 6917679 ~ 6923714 (-)

Expression


Co-expression Network