AMCG00015271


Basic Information

Item Value
gene id AMCG00015271
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 6410647 ~ 6419481 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015271
ATGCCAAATGCACGTTACTGCCCCGTTATCCGTGGTGTCTCCTTCACAGTGCCCATCAAGCTCGTGTACAACCGGTTCCACTATTCCTACCAGATTGGCTACCATCCCACATTCCCTCAGCATGGCAGCTCCCTTCCAGGCATGGATAAGTTCACCTTCTTCAGAGAGCTGAAGAACAGACGCTGCTATGTCCTGATCACCACCAATGGCACAGTATCTGTAACTCTACTGGCTGGTGTGGATATTGTTGGTGGTGTGACAATTTTCATGAAGAGATGCACTCAACAGTTAGCATGCACTACAGGCGTGTGGACCTGCTGTGAAGGAAACCTTTGCAATGATGCCAAACGTGCGGGACCAAGCGTCCTCCTTGTGCTGGTGCCTCTTGTCTCCATCCTCCTCCGCTGAGCAACCTTCACCAACccctttactttttcttttaatgtacttctgtatttttaaaataattatgtgtgtgtgttggggggtggggggggagaaatTCATGACATTGCATAGAAATAATATGGTGGTTAATGTGTAAAGTGAGATGGTTTCAGAGACTAACAGTTTCATGTTGTAGACTAAAAGAGGCAGAATAATTTCCAGGCTGtgcttaaaaacatatttaaatttggaGTAATCAAAAGCagtatgttattttgtttctgttaaacaTCTGCTTTGTCTACAAGTTCCTTATATGCAATTTGTTCCAGtttctgtgtataaatgtcTGTCAAAAGCTGGACTAAATTCAGAGTCAGGGAGACACAGTGGAGgacgtctctctgtgtgtgcccTGGCACTTCAGAGGCTTGTGTAATAAACCTGCTGATTATTGA
>TU120631
GCAGACACACATCTGATGTCAAGATTACAAATCTGGTAAACGCCCCTTCTCATGGTTGAATATATAGGAGGAGCGCTGGAGTTTCACTTCACTGAGGCTGTTGAAGATGAACCTGCTCATGACCTTCGGCTTTGCTTGCTCACTGCTTTCTTCAGCGTCTGGACTGCAGTGTTATTCCTGCTCGAATATGCAAACAGACTGCAATCAAAAAGAAACATGTGATGCTTTAGAAGATCGATGTATGAAAAGCTCAAATATTGTTGGTGGTGTGACAATTTTCATGAAGAGATGCACTCAACAGTTAGCATGCACTACAGGCGTGTGGACCTGCTGTGAAGGAAACCTTTGCAATGATGCCAAACGTGCGGGACCAAGCGTCCTCCTTGTGCTGGTGCCTCTTGTCTCCATCCTCCTCCGCTGAGCAACCTTCACCAACccctttactttttcttttaatgtacttctgtatttttaaaataattatgtgtgtgtgttggggggtggggggggagaaatTCATGACATTGCATAGAAATAATATGGTGGTTAATGTGTAAAGTGAGATGGTTTCAGAGACTAACAGTTTCATGTTGTAGACTAAAAGAGGCAGAATAATTTCCAGGCTGtgcttaaaaacatatttaaatttggaGTAATCAAAAGCagtatgttattttgtttctgttaaacaTCTGCTTTGTCTACAAGTTCCTTATATGCAATTTGTTCCAGtttctgtgtataaatgtcTGTCAAAAGCTGGACTAAATTCAGAGTCAGGGAGACACAGTGGAGgacgtctctctgtgtgtgcccTGGCACTTCAGAGGCTTGTGTAATAAACCTGCTGATTATTGACTCTGGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015271 False 845 mRNA 0.44 4 6410655 6419481
TU120631 True 866 lncRNA 0.42 3 6410647 6412709

Neighbor

gene id symbol gene type direction distance location
AMCG00015261 NA coding downstream 265923 6124100 ~ 6144724 (-)
AMCG00015259 NA coding downstream 313629 6084877 ~ 6097018 (-)
AMCG00015260 NA coding downstream 327156 6078223 ~ 6083491 (-)
AMCG00015258 NA coding downstream 402403 5975211 ~ 6008244 (-)
AMCG00015251 NA coding downstream 496710 5900594 ~ 5913937 (-)
AMCG00015270 dyrk1b,LOC106605641,LOC106578455,LOC107685988,LOC107737818,LOC107666783 coding upstream 11137 6430618 ~ 6440642 (-)
AMCG00015272 fbl,LOC107719117,LOC107666874,LOC102785674,LOC107737817 coding upstream 68961 6488442 ~ 6501219 (-)
AMCG00015273 LOC108437392,LOC105891768,LOC107719116,LOC107737835,LOC108256255,LOC107666762 coding upstream 95885 6515366 ~ 6525807 (-)
AMCG00015275 NA coding upstream 170712 6590193 ~ 6591000 (-)
AMCG00015274 NA coding upstream 188568 6608049 ~ 6609427 (-)
G96696 NA non-coding downstream 48238 6355020 ~ 6362409 (-)
G96653 NA non-coding downstream 181871 6228514 ~ 6228776 (-)
G96650 NA non-coding downstream 187018 6157103 ~ 6223629 (-)
G96643 NA non-coding downstream 289645 6120654 ~ 6121002 (-)
G96642 NA non-coding downstream 290994 6118621 ~ 6119653 (-)
G96873 NA non-coding upstream 567919 6987400 ~ 7063937 (-)
G96967 NA non-coding upstream 853430 7272911 ~ 7277373 (-)
G96984 NA non-coding upstream 916534 7336015 ~ 7337227 (-)
G96988 NA non-coding upstream 931028 7350509 ~ 7350785 (-)
G96994 NA non-coding upstream 942904 7362385 ~ 7364999 (-)
AMCG00015267 NA other downstream 26027 6368754 ~ 6384620 (-)
AMCG00015257 NA other downstream 338522 6025368 ~ 6072125 (-)
AMCG00015256 NA other downstream 346488 6049477 ~ 6064159 (-)
AMCG00015244 NA other downstream 653538 5753593 ~ 5757109 (-)
AMCG00015230 NA other downstream 947619 5394386 ~ 5463028 (-)
G96766 NA other upstream 279376 6698857 ~ 6700357 (-)
AMCG00015283 NA other upstream 450981 6870462 ~ 6877734 (-)
AMCG00015285 NA other upstream 471754 6891235 ~ 6896427 (-)
AMCG00015288 NA other upstream 498198 6917679 ~ 6923714 (-)
AMCG00015305 NA other upstream 971408 7390889 ~ 7448294 (-)

Expression


Co-expression Network