AMCG00015283


Basic Information

Item Value
gene id AMCG00015283
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 6870462 ~ 6877734 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015283
ATGGGTGACGGTCGAGAGACGGAAAACAGGATCCGCAGGATTAAGCAAAAGAGTAGTCAAAGGGGCAGGCAAGAGgtTAATAAGCTCTACTACACACCAGAAGCCGAGTGGAACAGTGAGGAACATGTTGCTCAAGGCACCCAGATCCTGATTGACTTCATCATCAGGATTAAGATAAAGTTTCCAAATTGGCCCAAGGAGCATTGGTTTAAAGGGGGGATAGCAGCCTACTGTGCTGGAGATGGAAATGTGGAGTCGTATGAAAAGGTGGATGATCACACCCCTGGAAAGGACTTTGCCAATGATGTTGTTGCCAGAGCCCAGTGGTACAAGAAGAATGGATTTTGA
>TU120734
caggtTAATAAGCTCTACTACACACCAGAAGCCGAGTGGAACAGTGAGGAACATGTTGCTCAAGGCACCCAGATCCTGATTGACTTCATCATCAGGATTAAGATAAAGTTTCCAAATTGGCCCAAGGAGCATTGGTTTAAAGGGGGGATAGCAGCCTACTGTGCTGGAGATGGAAATGTGGAGTCGTATGAAAAGGTGGATGATCACACCCCTGGAAAGGACTTTGCCAATGATGTTGTTGCCAGAGCCCAGTGGTACAAGAAGAATGGATTTTGAAATAATTCTTAGgcctctgaaaaataaagtggcAATTCTGAAAAGCTAATGCATTTttgttaaaattgtattggggactattaaactattaaaatacatttcttcctTGTAGTGGGAAGGAAGCCATAGCTGTGTAGTTCTGGGGACAGGGGAGCAATTTGTCTGtataacaataatgtatttgcatcaatgttttgtcatcaataaaatacatttcacagattAGTAAATAagctatacaaataaagttCATGAATT

Function

GO:

id name namespace
GO:0009056 catabolic process biological_process
GO:0043170 macromolecule metabolic process biological_process
GO:0016798 hydrolase activity, acting on glycosyl bonds molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015283 False 348 mRNA 0.47 3 6870743 6877734
TU120734 True 534 lncRNA 0.39 3 6870462 6871498

Neighbor

gene id symbol gene type direction distance location
AMCG00015282 NA coding downstream 15901 6835203 ~ 6854561 (-)
AMCG00015279 arhgap30,LOC106605587 coding downstream 105208 6731492 ~ 6765254 (-)
AMCG00015278 NA coding downstream 179081 6672892 ~ 6691381 (-)
AMCG00015274 NA coding downstream 261035 6608049 ~ 6609427 (-)
AMCG00015275 NA coding downstream 279462 6590193 ~ 6591000 (-)
AMCG00015287 NA coding upstream 6310 6884044 ~ 6885454 (-)
AMCG00015286 NA coding upstream 75585 6953319 ~ 6968744 (-)
AMCG00015295 NA coding upstream 138382 7016116 ~ 7030193 (-)
AMCG00015294 NA coding upstream 160113 7037847 ~ 7042992 (-)
AMCG00015296 NA coding upstream 207962 7085696 ~ 7100008 (-)
G96696 NA non-coding downstream 508053 6355020 ~ 6362409 (-)
G96653 NA non-coding downstream 641686 6228514 ~ 6228776 (-)
G96650 NA non-coding downstream 646833 6157103 ~ 6223629 (-)
G96643 NA non-coding downstream 749460 6120654 ~ 6121002 (-)
G96642 NA non-coding downstream 750809 6118621 ~ 6119653 (-)
G96873 NA non-coding upstream 109666 6987400 ~ 7063937 (-)
G96967 NA non-coding upstream 395177 7272911 ~ 7277373 (-)
G96984 NA non-coding upstream 458281 7336015 ~ 7337227 (-)
G96988 NA non-coding upstream 472775 7350509 ~ 7350785 (-)
G96994 NA non-coding upstream 484651 7362385 ~ 7364999 (-)
G96766 NA other downstream 170105 6698857 ~ 6700357 (-)
AMCG00015271 NA other downstream 450981 6410647 ~ 6419481 (-)
AMCG00015267 NA other downstream 485842 6368754 ~ 6384620 (-)
AMCG00015257 NA other downstream 798337 6025368 ~ 6072125 (-)
AMCG00015256 NA other downstream 806303 6049477 ~ 6064159 (-)
AMCG00015285 NA other upstream 13501 6891235 ~ 6896427 (-)
AMCG00015288 NA other upstream 39945 6917679 ~ 6923714 (-)
AMCG00015305 NA other upstream 513155 7390889 ~ 7448294 (-)
G97125 NA other upstream 908353 7786087 ~ 7786442 (-)
AMCG00015333 nxf1,LOC105897453,LOC108417053,LOC106603139 other upstream 1192301 8070035 ~ 8091826 (-)

Expression


Co-expression Network