AMCG00015288


Basic Information

Item Value
gene id AMCG00015288
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 6917679 ~ 6923714 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015288
ATGAAGAAGAGGATTGAGGATTTCGATGAGGAATACATTGCTCTTCAAGTTAGTCTGCTTGATGATGTCATCGCTCTGGGAGCCAACGCTGCAGCCAGGGTCACAGCGGTGGTGGGCGGCATACTTGCTGGCATCGCCCTGATAATTGATATGGTCAACATCATCCGGAAGGCCAAAGATCTGCATGCAGGGTGCAAGACTGAAGTTGCCCAAGAGGAAATGATCAGATCCATGGAAAGCCAGTACTTGGACAAGAGGAGGGTCATTGAAGACTTGCTGAAGGAGATGGAAGCCATTGCAGATTGGATGGACTTTACTCACAAGGGCACCACCATAGGCAGTATCACAGGAAGTTCTGTGGCGGCAGCCGTGTCCATTCTGACCATCATTGGCTTGGCGCTGATGCCTGTCACCTTCGGGACCTCATTAATAATCAGCGGGGTCGGGGCGGGAATTGGCGTAGCTGGCAGCATCACGTCAATCTCTTCTGACGTTGGGAGACGCATCAAGAACAAGCAATACAAGGAGGAGCTGGAAGCTAAGATGCAGAGCATTGAAAAAGACTTTGACAATCTGCAGGAGTCCATCAAAACCGTCTGCAAGACACTGTCGCAGTTGCAGGAGGAGGTCAGCGGCATGTCGGCGTTAATGGGGGGAGTGGGCATACTGACCAGCGTTTTTTCCCTCGCCCGGGCAGTTAGTCTGCTTGATGATGTCATCGCTTTGGGAGCCAACGCTGCAGCCAGGGTCACAGCAGTGGTGGGCGGCTTACTTGCTGGCATCGCCCTGATTATGGATATGGTCAACATTATCCGCAAGGCCAAAGATCTGCATGCAGGGTGCAAGACTGAAGCTGCCAAAGAGGTCCGCAACAAAGTCGAGGAGATTCAGTTCAACCTCAATAAGATCGGAATCTTCATTTCCAAGTTAAGGAGTATCGGAGATACCACCCCCTCCATTGAAGTAACTTCTGAAGCTTTTGGACCTTCTTCCAAACTGTCCATGAACTTGTCAAATTAG
>TU120782
NTCGTTAATAATCAGCGGGGTCGGGGCGGGAATTGGCGTAGCTGGCGGCATCACGTCAATCTCTTCTGACGTTGGGAGACACATCAAGAACAAGCAATACAAGGAGGAGCTTGAAGCTAAGATACAGAGCATTGAAATAGACTTTAGCAATCTACAGGAGTCCATCAAAACCGTCTGCCAGACACTGTCGCAGTTGCAGGAGGAGGTCAGCGGCATGTCGGCGTTAATGGGGGGAGTGGGCATACTGACCAGCGTTTTTTCCCTCGCCCGGGCAGTTAGTCTGCTTGATGATGTCATCGCTTTGGGAGCCAACGCTGCAGCCAGGGTCACAGCAGTGGTGGGCGGCTTACTTGCTGGCATCGCCCTGATTATGGATATGGTCAACATTATCCGCAAGGCCAAAGATCTGCATGCAGGGTGCAAGACTGAAGCTGCCAAAGAGGTCCGCAACAAAGTCGAGGAGATTCAGTTCAACCTCAATAAGATCGGAATCTTCATTTCCAAGTTAAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015288 True 1020 mRNA 0.51 3 6917679 6923714
TU120782 False 511 TUCP 0.51 2 6917766 6921641

Neighbor

gene id symbol gene type direction distance location
AMCG00015287 NA coding downstream 32225 6884044 ~ 6885454 (-)
AMCG00015282 NA coding downstream 63118 6835203 ~ 6854561 (-)
AMCG00015279 arhgap30,LOC106605587 coding downstream 152425 6731492 ~ 6765254 (-)
AMCG00015278 NA coding downstream 226298 6672892 ~ 6691381 (-)
AMCG00015274 NA coding downstream 308252 6608049 ~ 6609427 (-)
AMCG00015286 NA coding upstream 29605 6953319 ~ 6968744 (-)
AMCG00015295 NA coding upstream 92402 7016116 ~ 7030193 (-)
AMCG00015294 NA coding upstream 114133 7037847 ~ 7042992 (-)
AMCG00015296 NA coding upstream 161982 7085696 ~ 7100008 (-)
AMCG00015301 NA coding upstream 203591 7127305 ~ 7213377 (-)
G96696 NA non-coding downstream 555270 6355020 ~ 6362409 (-)
G96653 NA non-coding downstream 688903 6228514 ~ 6228776 (-)
G96650 NA non-coding downstream 694050 6157103 ~ 6223629 (-)
G96643 NA non-coding downstream 796677 6120654 ~ 6121002 (-)
G96642 NA non-coding downstream 798026 6118621 ~ 6119653 (-)
G96873 NA non-coding upstream 63686 6987400 ~ 7063937 (-)
G96967 NA non-coding upstream 349197 7272911 ~ 7277373 (-)
G96984 NA non-coding upstream 412301 7336015 ~ 7337227 (-)
G96988 NA non-coding upstream 426795 7350509 ~ 7350785 (-)
G96994 NA non-coding upstream 438671 7362385 ~ 7364999 (-)
AMCG00015285 NA other downstream 21252 6891235 ~ 6896427 (-)
AMCG00015283 NA other downstream 39945 6870462 ~ 6877734 (-)
G96766 NA other downstream 217322 6698857 ~ 6700357 (-)
AMCG00015271 NA other downstream 498198 6410647 ~ 6419481 (-)
AMCG00015267 NA other downstream 533059 6368754 ~ 6384620 (-)
AMCG00015305 NA other upstream 467175 7390889 ~ 7448294 (-)
G97125 NA other upstream 862373 7786087 ~ 7786442 (-)
AMCG00015333 nxf1,LOC105897453,LOC108417053,LOC106603139 other upstream 1146321 8070035 ~ 8091826 (-)
G97411 NA other upstream 1207593 8131307 ~ 8134115 (-)
AMCG00015348 ehd1b,LOC107718765,LOC107720605,LOC106603140,LOC107548869,LOC106930329,LOC103471421,LOC103136898 other upstream 1299485 8223199 ~ 8283629 (-)

Expression


Co-expression Network