AMCG00015292


Basic Information

Item Value
gene id AMCG00015292
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 7033028 ~ 7041181 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015292
atgtctaaaacCACAAAAGACTGGATTATAGACACGCTGGAAAATCTTGTGGACGTAGATCTAAAGAAATTTAAGAGTAAGTTGTGCGATCGTCCAGACGAGCCCAAAATCCGCAAGGGAGCGATTCAAAAAGCCGACTACGTGGACCTGGCAGACAAACTAGTTAGTACTTACACAGAAAATGGAGCTGTGAATGTGACGATCGAGGTGCTAGAAAGCATTGGTCTAAAGCAAGAAGCTGCTGATCTAAGAAACGGCACGAAAACATGTAAGTCCCCCAGTTCAAGAAAGCTAGTCAAttcaaaAGAAATGTCAATAGGGCAACAGAAACAATATCAGAAAGCAGTGGTGAGATCATGGCAATGGAgagtttacatgttttttttcctgtgttgtttcTCCATAGGAGAGCATGTGGTTGACAAGCACAGGGCAGCTCTCATACAGAGAGTGTCTCAGGTGGAGCCGATCCTGGACGCCCTGCTTGCGAGCAAAATCCTCAACCAtgaaatgtacagcaaaatccTAGCGGAAAGCACCTCCCAGTCCAAGATGCGATTGCTGCTCAGCGGCCCAATGGTGTCTTGCGGCATCAGAGGGAAGGACGAGCTGTGGAGGATTTTAAAGAAACAGGAGCCCTACATGACGATTAGGATGACAATCATCCAGAGCTGCAGCCCCACGATGGTCACATACATCATGATCTCCGAGATGATGGATGTCAGCTCCCGGTTAGCTGTGGAGCAGGGGAAGACAAGACCGAGAGACACA

Function

GO: NA

KEGG:

id description
K12799 PYCARD, ASC; apoptosis-associated speck-like protein containing a CARD

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015292 True 771 mRNA 0.47 3 7033028 7041181

Neighbor

gene id symbol gene type direction distance location
AMCG00015291 NA coding upstream 7982 7017496 ~ 7025046 (+)
AMCG00015289 LOC101167647,LOC102779956,LOC107379074 coding upstream 36274 6991103 ~ 6996754 (+)
AMCG00015284 NA coding upstream 147655 6810867 ~ 6885373 (+)
AMCG00015281 NA coding upstream 227116 6804656 ~ 6805912 (+)
AMCG00015280 NA coding upstream 230947 6800957 ~ 6802081 (+)
AMCG00015290 NA coding downstream 20721 7061902 ~ 7079471 (+)
AMCG00015298 NA coding downstream 134154 7175335 ~ 7177830 (+)
AMCG00015297 NA coding downstream 218361 7259542 ~ 7273255 (+)
AMCG00015302 NA coding downstream 342046 7383227 ~ 7386810 (+)
AMCG00015306 NA coding downstream 421374 7462555 ~ 7473836 (+)
G96837 NA non-coding upstream 111387 6917806 ~ 6921641 (+)
G96767 NA non-coding upstream 329934 6701612 ~ 6703094 (+)
G96716 NA non-coding upstream 542505 6455832 ~ 6490523 (+)
G96710 NA non-coding upstream 601793 6429589 ~ 6431235 (+)
G96697 NA non-coding upstream 647461 6378771 ~ 6385567 (+)
G96915 NA non-coding downstream 104770 7145951 ~ 7146204 (+)
G96936 NA non-coding downstream 175459 7216640 ~ 7225338 (+)
G96992 NA non-coding downstream 323202 7364383 ~ 7364984 (+)
G97059 NA non-coding downstream 592200 7633381 ~ 7649307 (+)
G97071 NA non-coding downstream 612943 7654124 ~ 7654649 (+)
AMCG00015277 NA other upstream 341229 6686351 ~ 6691799 (+)
G96420 NA other upstream 1567594 5426879 ~ 5465434 (+)
G96415 NA other upstream 1641305 5388937 ~ 5391723 (+)
AMCG00015215 NA other upstream 1913627 5084574 ~ 5119401 (+)
AMCG00015212 NA other upstream 1955125 5068047 ~ 5077903 (+)
G97006 NA other downstream 374188 7415369 ~ 7415762 (+)
AMCG00015324 esrra,LOC107669367,LOC107715365,LOC104926321,LOC106534575 other downstream 905027 7946208 ~ 7956114 (+)
AMCG00015334 NA other downstream 1033000 8074181 ~ 8078832 (+)
AMCG00015343 gng3,LOC107559409 other downstream 1083125 8124306 ~ 8126457 (+)
AMCG00015335 NA other downstream 1106164 8147345 ~ 8149159 (+)

Expression


Co-expression Network