AMCG00015302


Basic Information

Item Value
gene id AMCG00015302
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 7383227 ~ 7386810 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015302
attttgaaaagtgaaatcCTTACcatttttgtgtaatttgacCATGAAAAGTTGTAAAGTGTGGAAATCTGTGCAATGCAAACACAGATCTCAATTACCTTATTTAGTTAACAAattcactgttcactgtttcAATGTGACAGTTTTGTGGAAGTCTACAGcagcaaaacatacaaaagaaatTGTAAATAACCCAAACGGGcagcaaaatgtaatgttggGTGTGCCAGAGAATGAAACGCATACCCAAACATGGCTGCTACatgcacctttttaaaaatgtgacatccaCCCCACACAGATGCATGTAGGTTGGTAAAAACATGCCACTAGCACAAAATGTAGCTGGCTGATTTCTTTCATACAGATGTCTTTAGGTaaggcatttaattaaaaataaaatgcaatataatagCCAATGACGTTCAATTCAAGTTTGGTTGTTTTgggagaaattatttttttgtatagcCAAAGGGGAAAAGGCTGGAAGTTTGCAATTACTAATCCAATTTCCTGACTTCTCCTTGTCTTCCCCCTTTTTCCACTCCTTGTTTGCATTCAGCAGAGCTGCACAATCAGCTGCTGAAAAAGATGTACTGAAACCATTTTCCATCTGACTCAGAATAAGTTTGAGTTTCAGCCACTCTGCACTCCCACACTTTGACAGAGATAAGggttgtgttttatgtgtgtagTGCATTCCTCAGCCATGTTCCAGTTATTTGTCTCATATCCAGGATTCCCTGGTAGATGGCAGGGTTATTAGAAGTCAAGGATGTTGGATGCAATGAAAAGTCTTAAAGAGACTTGTAGAAGGTAATCAGTATACAGATAAGTTCTTGTATGCCATGGAAGACAATGGGGAAAGAAAGTCATAGTTTGTAAACCAAATGTTTTTGCTGAATGTgcaaaaaaaccaaaaacatgcaTGTCTACTTTTTAGTGATGATCAGTGTACCCTGATAACCTCTTCCCACCCATTGCATGAAAATtctgaaaaacaatgcattgcagtttatttaacaaatcttGTATAATGCCATATTCAGGTGAATACATTATTCCACTAGACCTTAAATGTACAGGCCAGCTGatataaatgtttgattgcTTCTGTACCAGCACTGGTCACACCAATCTGTACTGCTGCATTATTTAACTGTCCAGAAAAGTAATTATTTGGCTAGGGTGACATACAGGCTGTGGCGGTGCTGAAATGCAAAGCAGATTGATGAGGAATAGAACTGGGGCAGCTGCCAATGTAATTGGGGATATACACATTCAGATTCACTGTATACAAATTAAGAATTCTGGATATAAAATATTACAGGATGACCGTATCTCTTTGTACCTTCAGCACGATCACCATTGTGCCCTTTTGGTGTTGGAATATATTGTACCATCCAAAAGACGGCTGAATAGTGCTGGTCAATCATGGCTGTCTCTTTCTCCTAGACTGGCTCctggtggtgctggtggtgcTGGGATTCTTGCTCTTCCTCCTTCTGATTGGCATCTGCTGGTGCCAGTGTTGCCCACACACCTGCTGCTGCTATGTGCGCTGCCCCTGCTGCCCCGATCGCTGCTGCTGTCCCCAAGCACTATATGAAGCAGGGAAGGCTGCCACATCTGGAGTGCCCAGTATGTATGCCCCTACCTTGTATGCACCCACCATCTACTCCCAGCCACCCCAGGCTAAAATGATGCCCTCTGCTATGCCCATGATGCCCATTCATAATCCCAACAATGGGTACATGACAGCATATGATGCGGCCAGCTCAGTTGGGCAAGGGTCTCAGGCTCCTCTCCTGCATGAACAAGATACCGGCGGCAACTCTGtGCGCAGTGGTTACCGCATTCAGGCAAACCAGGCAGACAACTCTACCCGGGTCCTTTATTATATGGAGAGGGAGTTGGCCAATCTGGACCCTGCAAGACCTGGAGATAACAGAGGGAAATATGATCGGTGTAAGATGaca

Function

GO: NA

KEGG:

id description
ko04520 Adherens junction

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015302 True 1982 mRNA 0.42 4 7383227 7386810

Neighbor

gene id symbol gene type direction distance location
AMCG00015297 NA coding upstream 109972 7259542 ~ 7273255 (+)
AMCG00015298 NA coding upstream 205397 7175335 ~ 7177830 (+)
AMCG00015290 NA coding upstream 303756 7061902 ~ 7079471 (+)
AMCG00015292 NA coding upstream 342046 7033028 ~ 7041181 (+)
AMCG00015291 NA coding upstream 358181 7017496 ~ 7025046 (+)
AMCG00015306 NA coding downstream 75745 7462555 ~ 7473836 (+)
AMCG00015309 NA coding downstream 117721 7504531 ~ 7558297 (+)
AMCG00015307 NA coding downstream 173814 7560624 ~ 7564400 (+)
AMCG00015308 NA coding downstream 195242 7582052 ~ 7587325 (+)
AMCG00015311 NA coding downstream 312037 7698847 ~ 7708047 (+)
G96992 NA non-coding upstream 18243 7364383 ~ 7364984 (+)
G96936 NA non-coding upstream 157889 7216640 ~ 7225338 (+)
G96915 NA non-coding upstream 237023 7145951 ~ 7146204 (+)
G96837 NA non-coding upstream 461586 6917806 ~ 6921641 (+)
G96767 NA non-coding upstream 680133 6701612 ~ 6703094 (+)
G97059 NA non-coding downstream 246571 7633381 ~ 7649307 (+)
G97071 NA non-coding downstream 267314 7654124 ~ 7654649 (+)
G97072 NA non-coding downstream 270166 7656976 ~ 7657282 (+)
G97118 NA non-coding downstream 385979 7772789 ~ 7773054 (+)
G97120 NA non-coding downstream 386463 7773273 ~ 7773477 (+)
AMCG00015293 NA other upstream 302439 6997597 ~ 7080788 (+)
AMCG00015277 NA other upstream 691428 6686351 ~ 6691799 (+)
G96420 NA other upstream 1917793 5426879 ~ 5465434 (+)
G96415 NA other upstream 1991504 5388937 ~ 5391723 (+)
AMCG00015215 NA other upstream 2263826 5084574 ~ 5119401 (+)
G97006 NA other downstream 28559 7415369 ~ 7415762 (+)
AMCG00015324 esrra,LOC107669367,LOC107715365,LOC104926321,LOC106534575 other downstream 559398 7946208 ~ 7956114 (+)
AMCG00015334 NA other downstream 687371 8074181 ~ 8078832 (+)
AMCG00015343 gng3,LOC107559409 other downstream 737496 8124306 ~ 8126457 (+)
AMCG00015335 NA other downstream 760535 8147345 ~ 8149159 (+)

Expression


Co-expression Network