AMCG00015314


Basic Information

Item Value
gene id AMCG00015314
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 7748342 ~ 7757219 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015314
ATGCCTCCCAGTATAGCCACCCTGCGTGGCTCCTGTGTGCTGATCCCCTGCCAGTTTGAGGTTGGTTATTACTACAGAAGCAAGGTGAAGAATCTGGAAACTGTATCCTGGATAAAGGGTTCACCAATGCGATACACTGTGTTGGAATCCAATGGATATGAATCTGATGAATACAGTGTACGTGGGAATGTCACTGGGAACTTTAGAGTCCAGAATTGCACCACCATCCTGATGAATATACAGAAAGATTATGAGGACAATTATCATTTCAGACTAGAAAGTCCCCCCAACCCCCAGGTAACCCCACCAGCAGCTGTGAAGGAGGGCAGCCCTGTGAGTTTCACCTGCTCTGCTGCAGCCCCCTGCCCCACACTCCCCCCAGCCCTGACATGGACTCAGGGGGTTAATGGGAGTGTGGATCAACAGGAGGTCGAGAATCAAGATAAAACCCAGTCTGTGTCTTCTGTGCTGACCTTCACGCCTTCTCATCTCCACCATGGGCACACGATCACCTGCACCGCGCTCTATTCACTGCAACCGCAGAACAAAATGGCCGAAGAGACCGCGACTCTTGATGTTCTGTACTTGGGAATTGAGTTCCACATGTTCAGCGAGAGGAACAGATAG

Function

GO: NA

KEGG:

id description
ko04672 Intestinal immune network for IgA production

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015314 True 627 mRNA 0.51 3 7748342 7757219

Neighbor

gene id symbol gene type direction distance location
AMCG00015313 NA coding downstream 38074 7707910 ~ 7710268 (-)
AMCG00015304 NA coding downstream 358782 7386859 ~ 7389560 (-)
AMCG00015303 NA coding downstream 450757 7294862 ~ 7297585 (-)
AMCG00015300 NA coding downstream 516406 7231442 ~ 7231936 (-)
AMCG00015299 psmc4,prs6b,LOC107719110,LOC106605234 coding downstream 524397 7217276 ~ 7223945 (-)
AMCG00015320 LOC107707189 coding upstream 63975 7821194 ~ 7825760 (-)
AMCG00015321 mrps12 coding upstream 69462 7826681 ~ 7828114 (-)
AMCG00015318 NA coding upstream 76099 7833318 ~ 7834220 (-)
AMCG00015319 NA coding upstream 99860 7857079 ~ 7861747 (-)
AMCG00015329 NA coding upstream 120215 7877434 ~ 7885936 (-)
G97041 NA non-coding downstream 128825 7497942 ~ 7619517 (-)
G96994 NA non-coding downstream 383343 7362385 ~ 7364999 (-)
G96988 NA non-coding downstream 397557 7350509 ~ 7350785 (-)
G96984 NA non-coding downstream 411115 7336015 ~ 7337227 (-)
G96967 NA non-coding downstream 470969 7272911 ~ 7277373 (-)
G97121 NA non-coding upstream 23173 7780392 ~ 7780598 (-)
G97130 NA non-coding upstream 57675 7814894 ~ 7815402 (-)
G97134 NA non-coding upstream 62585 7819804 ~ 7820189 (-)
G97221 NA non-coding upstream 212378 7969597 ~ 7970757 (-)
G97244 NA non-coding upstream 244267 8001486 ~ 8016073 (-)
AMCG00015305 NA other downstream 300048 7390889 ~ 7448294 (-)
AMCG00015288 NA other downstream 824628 6917679 ~ 6923714 (-)
AMCG00015285 NA other downstream 851915 6891235 ~ 6896427 (-)
AMCG00015283 NA other downstream 870608 6870462 ~ 6877734 (-)
G96766 NA other downstream 1047985 6698857 ~ 6700357 (-)
G97125 NA other upstream 28868 7786087 ~ 7786442 (-)
AMCG00015333 nxf1,LOC105897453,LOC108417053,LOC106603139 other upstream 312816 8070035 ~ 8091826 (-)
G97411 NA other upstream 374088 8131307 ~ 8134115 (-)
AMCG00015348 ehd1b,LOC107718765,LOC107720605,LOC106603140,LOC107548869,LOC106930329,LOC103471421,LOC103136898 other upstream 465980 8223199 ~ 8283629 (-)
AMCG00015361 NA other upstream 604395 8361614 ~ 8370031 (-)

Expression


Co-expression Network