Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00015316 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030132.1 |
| NCBI id | CM030132.1 |
| chromosome length | 32980562 |
| location | 7845592 ~ 7849003 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0006412 | translation | biological_process |
| GO:0005840 | ribosome | cellular_component |
| GO:0003735 | structural constituent of ribosome | molecular_function |
| id | description |
|---|---|
| K02867 | RP-L11, MRPL11, rplK; large subunit ribosomal protein L11 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00015316 | True | 393 | mRNA | 0.56 | 4 | 7845592 | 7849003 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00015322 | NA | coding | upstream | 10429 | 7830597 ~ 7835163 (+) |
| AMCG00015317 | NA | coding | upstream | 50637 | 7784533 ~ 7794955 (+) |
| AMCG00015312 | NA | coding | upstream | 77118 | 7759071 ~ 7768474 (+) |
| AMCG00015310 | NA | coding | upstream | 95008 | 7735343 ~ 7750584 (+) |
| AMCG00015315 | NA | coding | upstream | 112395 | 7732409 ~ 7733197 (+) |
| AMCG00015323 | ccdc85b,LOC102791751 | coding | downstream | 52118 | 7901121 ~ 7901720 (+) |
| AMCG00015325 | LOC106603145 | coding | downstream | 115644 | 7964647 ~ 7970683 (+) |
| AMCG00015344 | ehd1b,LOC107720605,LOC107548869,LOC107718765,LOC107701170,LOC107555151 | coding | downstream | 366012 | 8215015 ~ 8224773 (+) |
| AMCG00015346 | NA | coding | downstream | 410170 | 8259173 ~ 8264168 (+) |
| AMCG00015357 | NA | coding | downstream | 523463 | 8372466 ~ 8381177 (+) |
| G97133 | NA | non-coding | upstream | 25405 | 7819675 ~ 7820187 (+) |
| G97120 | NA | non-coding | upstream | 72115 | 7773273 ~ 7773477 (+) |
| G97118 | NA | non-coding | upstream | 72538 | 7772789 ~ 7773054 (+) |
| G97072 | NA | non-coding | upstream | 188310 | 7656976 ~ 7657282 (+) |
| G97071 | NA | non-coding | upstream | 190943 | 7654124 ~ 7654649 (+) |
| G97152 | NA | non-coding | downstream | 28437 | 7877440 ~ 7878313 (+) |
| G97157 | NA | non-coding | downstream | 39606 | 7888609 ~ 7892787 (+) |
| G97160 | NA | non-coding | downstream | 47202 | 7896205 ~ 7897377 (+) |
| G97172 | NA | non-coding | downstream | 71402 | 7920405 ~ 7931022 (+) |
| G97184 | NA | non-coding | downstream | 109652 | 7958655 ~ 7962088 (+) |
| G97006 | NA | other | upstream | 429830 | 7415369 ~ 7415762 (+) |
| AMCG00015293 | NA | other | upstream | 764804 | 6997597 ~ 7080788 (+) |
| AMCG00015277 | NA | other | upstream | 1153793 | 6686351 ~ 6691799 (+) |
| G96420 | NA | other | upstream | 2380158 | 5426879 ~ 5465434 (+) |
| G96415 | NA | other | upstream | 2453869 | 5388937 ~ 5391723 (+) |
| AMCG00015324 | esrra,LOC107669367,LOC107715365,LOC104926321,LOC106534575 | other | downstream | 97205 | 7946208 ~ 7956114 (+) |
| AMCG00015334 | NA | other | downstream | 225178 | 8074181 ~ 8078832 (+) |
| AMCG00015343 | gng3,LOC107559409 | other | downstream | 275303 | 8124306 ~ 8126457 (+) |
| AMCG00015335 | NA | other | downstream | 298342 | 8147345 ~ 8149159 (+) |
| AMCG00015345 | NA | other | downstream | 348069 | 8197072 ~ 8201857 (+) |
