AMCG00015327


Basic Information

Item Value
gene id AMCG00015327
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 7888625 ~ 7897453 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015327
CGGATGTATCGTCAGTAGAAAGTCCTCTATCCTCTCAACGGCGCTTCCGGTGCTGAGCGGAAATGGAGGGCGGGGGGGGACGGATGTTGCTGCAACGCCGCCGACAATAACATTACAGCGTCGCGCCGAGCGAGAACAGCGAGAGGAGACAGGCAGCCAGAGCCGTGCAGGGAtgggttacttttaaaacatattttagtcGGATTTTGAAACAGTCTCACTACACACTGACCACAGGGTATGTGTCTGTTGTTTAACCACAGCGACCTCTCTCAGATGTCCGATGACCCACTCGTGTTTTTACCTggaccccccctccccataaataaacattagtcTGAGCTTTTCCTTAGTGTTACTGAGTAGCTACGCTGTTTTTTGCGGCTTTGAAATGGCTTATTCGGCACCCGATTCCGCAGACAAAgcGCTGCGCATGGCGATGGAGCTGGACGTGTTTGTGGGGAACACAACCATCATGGACGAGGAGGTGTATCAGCTCTGGCTGGATGGGTACACAGTGACGGACGCGGTGTCCATGCGGGTGCGCTCTGGGATCCTGGAGCAGTGGGGGGCGTGCCAGGCGGTGCTGGAGAGCGACACTACGGACCACTACCGCACCTTCCAGATGGCCGAGAGGCTGTTGCACTGCCCCAGCAAACTGGCCAATCAGCTGCTCTTCCAGATCCCCCCGCAGCGCCAGGCCATGCTCATAGAGAGGTACTATGCGTTCGACCCTGCGTTCGTGCGTGAGCTGCTGGGGAAAAAGCTCTCCAAGGGAACCAAGAAGGACCTGGATGATGTGAGCACCAAGACCGGCGTCACCCTGAAGAGCTGCCGCAGAcagtttgaTAATTTTAAGCGGGTGTTCAAGGTGGTGGAGGAGATGAAGGGCCCCCTGGTGGAGAACATCAAGCAGCACTTCCTGCTGTCAGACAGGCTGGCCAGGGACTACGGCGCAATTGTGTTCTTTGCGAACATTCGCTTTGAGACTGGGAAGAAGAAGCTTCAGTATCTGAACTTTGAGGATTTCGCCTTCTGTGCTGGTCAGCTGATCCAGAACTGGACTGTTGGTGCCGTAGACAGCATGGTGGAGGACATGGACAATCTGTCTCGGGCGCTGGTGAACATCGCGGCCAAACTCATGCACACAAAGGATGTCAGGGACTTCTTCATCGACCTGGTGGAGAAGtttatCGAGCCGTGTCGGTCTGATCGCTGGGTGCTGTGTGATGTCAAAGCCTTCCTGACGCAGTACATGAACTCCGCTAGGGCCCTCGATGCCTTCAAgcaacAGGCGATCTGGGAGCGCTACATGACAGTGATCAGGAGCTGCATCCTGAAGATGTACCACGAGTAGCCCCCCCTTCCGCTCCCTTccctctgttctctctctacaccccTCCCCTGTTTTTCAACGATTCAGACAGGCAGGTGTGACTGAGTTCCTGTGAggacctctgacccctgaccccagaGAGCTGACCGCAGTGCagcatgtttttacatttaatttaaataaat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015327 True 1521 mRNA 0.55 10 7888625 7897453

Neighbor

gene id symbol gene type direction distance location
AMCG00015329 NA coding downstream 2689 7877434 ~ 7885936 (-)
AMCG00015319 NA coding downstream 26878 7857079 ~ 7861747 (-)
AMCG00015318 NA coding downstream 54405 7833318 ~ 7834220 (-)
AMCG00015321 mrps12 coding downstream 60511 7826681 ~ 7828114 (-)
AMCG00015320 LOC107707189 coding downstream 62865 7821194 ~ 7825760 (-)
AMCG00015326 NA coding upstream 6125 7903578 ~ 7908926 (-)
AMCG00015330 mus81 coding upstream 17618 7915071 ~ 7921825 (-)
AMCG00015328 NA coding upstream 41684 7939137 ~ 7941984 (-)
AMCG00015331 NA coding upstream 61513 7958966 ~ 7961889 (-)
AMCG00015332 LOC107559259 coding upstream 74411 7971864 ~ 7994682 (-)
G97134 NA non-coding downstream 68436 7819804 ~ 7820189 (-)
G97130 NA non-coding downstream 73223 7814894 ~ 7815402 (-)
G97121 NA non-coding downstream 108027 7780392 ~ 7780598 (-)
G97041 NA non-coding downstream 269108 7497942 ~ 7619517 (-)
G96994 NA non-coding downstream 523626 7362385 ~ 7364999 (-)
G97221 NA non-coding upstream 72144 7969597 ~ 7970757 (-)
G97244 NA non-coding upstream 104033 8001486 ~ 8016073 (-)
G97395 NA non-coding upstream 171327 8068780 ~ 8069037 (-)
G97409 gng3,LOC107559409 non-coding upstream 226815 8124268 ~ 8126464 (-)
G97475 NA non-coding upstream 534470 8431923 ~ 8433316 (-)
G97125 NA other downstream 102183 7786087 ~ 7786442 (-)
AMCG00015305 NA other downstream 440331 7390889 ~ 7448294 (-)
AMCG00015288 NA other downstream 964911 6917679 ~ 6923714 (-)
AMCG00015285 NA other downstream 992198 6891235 ~ 6896427 (-)
AMCG00015283 NA other downstream 1010891 6870462 ~ 6877734 (-)
AMCG00015333 nxf1,LOC105897453,LOC108417053,LOC106603139 other upstream 172582 8070035 ~ 8091826 (-)
G97411 NA other upstream 233854 8131307 ~ 8134115 (-)
AMCG00015348 ehd1b,LOC107718765,LOC107720605,LOC106603140,LOC107548869,LOC106930329,LOC103471421,LOC103136898 other upstream 325746 8223199 ~ 8283629 (-)
AMCG00015361 NA other upstream 464161 8361614 ~ 8370031 (-)
G97455 mark2a,LOC107715377 other upstream 512534 8409987 ~ 8411882 (-)

Expression


Co-expression Network