AMCG00015343 (gng3,LOC107559409)


Basic Information

Item Value
gene id AMCG00015343
gene name gng3,LOC107559409
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 8124306 ~ 8126457 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015343
atggagagggagaggagagagggaattggagaggagagagATGCTAAGAAGGAGTGGTACCCCTGGGttctctcctcttccccctccACCAGCCCTGGCATGGGTGTGGTGCAGACGGAAAGCTACACGaccctgagacagagagagaggagagaaggagagaacaCGACTGAGGAGGAGaacagaggagggagggagatagagaggtag
>TU121298
CGGCCCACCCCACCCAATTAATGCACTCCAATGCAGCTCCTTGGGAAGTACCACTGACAGCAAAGGGGAGGGTTCTGGATGGTAGTGACTaggactgcactgcactgcactacaatGTACTGTGCGGTGGTGTAGTGTGGAGGTGATCTCTGGCTTTGTTCGATAGCAGGGTGTGGTGCAGACGGAAAGCTACACGaccctgagacagagagagaggagagaaggagagaacaCGACTGAGGAGGAGaacagaggagggagggagatagagaggtagagagagaggaggagagacagaaagggCAGGTCCTTGAAGCCACcggagagcaagagaggagagtaaggagagagagagagaaaaagaggaggGAACCAGGCCTAAGTGACTGACCCAGTCCAATCGCTACACCTGATACAGGATGAAGGGAGAGAGCCCAGTGAACAGCACTATGAGTGTGTCTCAGGCTCGGAAGCTGGTGGAGCAGCTGAAGATCGAGGCCAGTATGTGCAGGATAAAGGTGTCGAAGGCAGCGGCTGAGCTCATGGCATACTGCGACGCCCACTGCTGCGAGGACCCGCTGCTCACCCCGGTGCCCACCTCTGACAACCCCTTCCGAGAGAAGAAGCTGTTCTGTGCCCTgctgtgagagggagagagggagaggagtggGGGGACTTTCTGCTGTGTTGTACGTGGGCGGGGGGGCTATGCTTTATGAACTGTAGACTGTAGCGGGTAAATGGTGC

Function

symbol description
gng3 Predicted to enable G-protein beta-subunit binding activity. Predicted to be involved in G protein-coupled receptor signaling pathway. Predicted to act upstream of or within signal transduction. Predicted to be located in plasma membrane. Predicted to be part of heterotrimeric G-protein complex. Is expressed in nervous system and trigeminal placode. Orthologous to human GNG3 (G protein subunit gamma 3).

NR:

description
guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015343 False 210 mRNA 0.57 3 8124306 8124884
TU121298 True 747 TUCP 0.56 3 8124608 8126457

Neighbor

gene id symbol gene type direction distance location
AMCG00015325 LOC106603145 coding upstream 153623 7964647 ~ 7970683 (+)
AMCG00015323 ccdc85b,LOC102791751 coding upstream 222586 7901121 ~ 7901720 (+)
AMCG00015316 NA coding upstream 275303 7845592 ~ 7849003 (+)
AMCG00015322 NA coding upstream 289143 7830597 ~ 7835163 (+)
AMCG00015317 NA coding upstream 329351 7784533 ~ 7794955 (+)
AMCG00015344 ehd1b,LOC107720605,LOC107548869,LOC107718765,LOC107701170,LOC107555151 coding downstream 88558 8215015 ~ 8224773 (+)
AMCG00015346 NA coding downstream 132716 8259173 ~ 8264168 (+)
AMCG00015357 NA coding downstream 246009 8372466 ~ 8381177 (+)
AMCG00015364 NA coding downstream 307026 8433483 ~ 8443894 (+)
AMCG00015369 sart1,LOC107568296 coding downstream 388256 8514713 ~ 8524559 (+)
G97284 NA non-coding upstream 7754 8114916 ~ 8116552 (+)
G97271 NA non-coding upstream 22541 8091095 ~ 8101765 (+)
G97206 NA non-coding upstream 69479 8051523 ~ 8054827 (+)
G97184 NA non-coding upstream 162218 7958655 ~ 7962088 (+)
G97172 NA non-coding upstream 193284 7920405 ~ 7931022 (+)
G97293 NA non-coding downstream 318 8126775 ~ 8128889 (+)
G97347 NA non-coding downstream 116320 8242777 ~ 8244987 (+)
G97350 NA non-coding downstream 121654 8248111 ~ 8250285 (+)
G97383 NA non-coding downstream 350765 8477222 ~ 8480537 (+)
G97543 NA non-coding downstream 486798 8613255 ~ 8616320 (+)
AMCG00015334 NA other upstream 45474 8074181 ~ 8078832 (+)
AMCG00015324 esrra,LOC107669367,LOC107715365,LOC104926321,LOC106534575 other upstream 168192 7946208 ~ 7956114 (+)
G97006 NA other upstream 708544 7415369 ~ 7415762 (+)
AMCG00015293 NA other upstream 1043518 6997597 ~ 7080788 (+)
AMCG00015277 NA other upstream 1432507 6686351 ~ 6691799 (+)
AMCG00015335 NA other downstream 20888 8147345 ~ 8149159 (+)
AMCG00015345 NA other downstream 70615 8197072 ~ 8201857 (+)
G97343 NA other downstream 106967 8233424 ~ 8294330 (+)
AMCG00015356 NA other downstream 162513 8288970 ~ 8293681 (+)
AMCG00015358 NA other downstream 168630 8295087 ~ 8303048 (+)

Expression


Co-expression Network