AMCG00015346


Basic Information

Item Value
gene id AMCG00015346
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 8259173 ~ 8264168 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015346
ATGGGAGGCCTGGGTGGTGGGCAGCGGAGGGCGGGAAGCATACTGAGACGCCGGCCTCCGGGGGGGAAAAGCGAAAACCGAGCGCTTAACCGCAGGGACTCCGCGTCCGACAGGATCCCAACTTTCTCCAACAACACACCCAGCTCCCGCGTTTCACAGCTTTGTCAAGCTTACCTTGAACAGCGCACTCTGTCCAGCAGCCCACGCTGCGCTCTCCCGCTGCTCGGTGCCCCCGGGCTGTGTGATGAACGGCGCCGCTATAAGAGAGGTGATTACCGGCCGCTGTCGGTGGTGTCCCTGCTTTCGCCACGGCTCCCTCCCGGCACGACACCAGGCTGCTCGGCAGTGACGTCACGCCACGTCACGCCACGCCACGCCGAGAAGAGCCCCGACAGCGCCGCCTACAGCCTTCCCCCGGTGAGTGCTCCTGCCCCAGCCTCTGCCCCCAGTGAGTCCGCTGCccctgctactgctgctgctgctgctgctgctgctATGTTCCCCTGGGCGATGCTCTCCTCCCTGGCCGACTCCACCCCGCCCCCGCTGGCCCCCCGCGCCCCGGAGGAGATGGTGCGCGAGACGTTGATGCTGGAGCTGAGCTCTCTGCTGAAGCACTGCGAGCGGCTGGGCCAGGAGAAGGCACTGGAGAGGCACCGGTGCCGCCGCCGCTCCAGTGTGGACTATTCCTGGCTGGCCTCGCCCCCCCGCCTGGCCTACCAGCTGTCCCCCGGCGAGCTGCTGGAGCTGGAAGAGCTGTGCGGCCGGATCCCCCCCCCGCAGTGCGGCCCCGTCATCCTCAGGTTCAGGAAGCTGGTGACCGAGTTCGAGCCAGAGGTGCAGGAGGTGTCGCGGCTCTTCCGCTCTGTGCTGCGGGACtcgctggaggaggaggaggaggagggggggcatGAGCGCAGCCAGTGGGACAAGCGGCGCAGCCAGAGCCTGTCCCTCGTCTCCTTCCGCTCCCGGCTGCGCATCAACCCCTTCAAGAGCGGCGGCGCCGGCACGCTGGCTGAGGACCCACTGTGGGGCGATGAGGAGGAGGCGGGGCCTGGCCCAGTGGGTGGGGCCAGGAGGGTGAGGAGCATGCCCGAGATCATGCCCACTGAGGCCCGGGCACCGCCCAGCTGCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015346 True 1140 mRNA 0.69 5 8259173 8264168

Neighbor

gene id symbol gene type direction distance location
AMCG00015344 ehd1b,LOC107720605,LOC107548869,LOC107718765,LOC107701170,LOC107555151 coding upstream 34400 8215015 ~ 8224773 (+)
AMCG00015325 LOC106603145 coding upstream 288490 7964647 ~ 7970683 (+)
AMCG00015323 ccdc85b,LOC102791751 coding upstream 357453 7901121 ~ 7901720 (+)
AMCG00015316 NA coding upstream 410170 7845592 ~ 7849003 (+)
AMCG00015322 NA coding upstream 424010 7830597 ~ 7835163 (+)
AMCG00015357 NA coding downstream 108298 8372466 ~ 8381177 (+)
AMCG00015364 NA coding downstream 169315 8433483 ~ 8443894 (+)
AMCG00015369 sart1,LOC107568296 coding downstream 250545 8514713 ~ 8524559 (+)
AMCG00015370 LOC102776143 coding downstream 288630 8552798 ~ 8572065 (+)
AMCG00015378 LOC105028067,LOC106563498,LOC106603157,LOC108412801,LOC108278882 coding downstream 327748 8591916 ~ 8596613 (+)
G97350 NA non-coding upstream 8888 8248111 ~ 8250285 (+)
G97347 NA non-coding upstream 14186 8242777 ~ 8244987 (+)
G97265 cfl1,LOC105028071,LOC106604708,LOC106611761 non-coding upstream 86162 8096386 ~ 8173011 (+)
G97293 NA non-coding upstream 130284 8126775 ~ 8128889 (+)
G97284 NA non-coding upstream 142621 8114916 ~ 8116552 (+)
G97383 NA non-coding downstream 213054 8477222 ~ 8480537 (+)
G97543 NA non-coding downstream 349087 8613255 ~ 8616320 (+)
G97547 NA non-coding downstream 359921 8624089 ~ 8624687 (+)
G97560 NA non-coding downstream 428260 8692428 ~ 8692642 (+)
G97588 NA non-coding downstream 455073 8719241 ~ 8719562 (+)
AMCG00015345 NA other upstream 57316 8197072 ~ 8201857 (+)
AMCG00015335 NA other upstream 110014 8147345 ~ 8149159 (+)
AMCG00015343 gng3,LOC107559409 other upstream 132716 8124306 ~ 8126457 (+)
AMCG00015334 NA other upstream 180341 8074181 ~ 8078832 (+)
AMCG00015324 esrra,LOC107669367,LOC107715365,LOC104926321,LOC106534575 other upstream 303059 7946208 ~ 7956114 (+)
AMCG00015356 NA other downstream 24802 8288970 ~ 8293681 (+)
AMCG00015358 NA other downstream 30919 8295087 ~ 8303048 (+)
AMCG00015362 NA other downstream 39217 8303385 ~ 8305677 (+)
AMCG00015359 NA other downstream 43412 8307580 ~ 8312199 (+)
AMCG00015365 naa40,LOC107750594,LOC107691908,LOC107749810 other downstream 78325 8342493 ~ 8433092 (+)

Expression


Co-expression Network