AMCG00015370 (LOC102776143)


Basic Information

Item Value
gene id AMCG00015370
gene name LOC102776143
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 8552798 ~ 8572065 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015370
ATGCTCTACCCGCCTGCCTGCAGAGTAGGAAGGGCGTGTGGTGGGCCGCCTCAGTCGGACATTAACCACCCAGCTCAAAGGTCTCCCCTCCTCGTGGGCTTCGTGCGTCTTGTTTTTAGTTCTTGTGGCCTCACCTCGATGATGAGGCTGTGGCTGTGGCGGGGGGGCCAGCGGTTCCTCGGACCGCGGCGGCTGGGGGCTCTGTCCACTGCCCTGCACAGCACCCAGCGCGTCCACTACAAACCCATCAAGAAAGTCATGGTGGCCAACAGGGGTGAGATAGCGATCCGGGTGTTCCGGGCCTGCACGGAGCTGGGCATCCGCACAGTGGCTGTGTACTCGGAGCAGGACACCGGCCAGATGCACCGGCAGAAGGCGGACGAGGCCTACTTACGCAGCGACTTTGCCCAGGCCTGCTGCGATGCTGGCGTACGCTTCATCGGCCCCTCGCCCGAGGTGGTGCGCAAGATGGGCGACAAGGTGGAGGCCCGAGCCATCGCCGTCAACGCAGGTGTGCCAGTGGTGCCAGGCACAGACTCCCCCATCTCATCACTGTCGGAAGCGCAGGAGTTTGCCAACACTTACGGCTTCCCCATCATCTTCAAGGCAGCCTACGGAGGAGGGGGCCGGGGCATGAGGGTGGTGCGCAAGTATGAGgagctggaggagaaTTACCAGCGCGCGTTCTCAGAGGCTCTGACGGCCTTTGGCAATGGTGCTCTGTTCGTGGAGAAATTCATCGAGAGGCCGCGGCACATTGAGGTGCAGATTCTGGGTGACAAGTACGGCAATGTGATCCACCTGTACGAGCGAGACTGCTCCATCCAGCGCCGACACCAGAAGGTGGTGGAGATCGCCCCAGCCGCCCAGCTGGACCCCCGGCTCCGCGACCGGCTCACCGCCGACTCGGTCAACCTGGCCAAGCAGGTGGGCTATGAGAACGCTGGTACGGTGGAGTTCCTAGTGGACAAACATGGCCGACACTTCTTCATCGAGGTCAACTCCCGCTTGCAGGTGGAGCACACGATCCGTGTGGCGGAGGGACGCTCGTTGGCAGAGCTAGGGCTGCGGCAGGAGGCGGTGCGGATCAACGGCTGTGCCATCCAGTGCCGCGTCACCACCGAGGACCCGGCCCGCGGCTTCCAGCCCGACACCGGCCGCATAGAGGTGTTCCGCAGCGGGGAGGGGATGGGCATCCGGCTGGACAGTGCGTCGGCCTTCCAGGGTGCAGTCATCTCCCCGCATTACGACTCACTGCTGGTCAAGGTGATCGGCAGCGGGAAAGACCTGCAGACAGCCGCCGCCAAGATGAGCCGTGCTCTCGCCGAGTTCCGCATCCGGGGCGTCAAGGTAGAGGGGCCGGGGGTCACGCTGGGGGCAGGCTGTCATGGCGAGTTGTCCTGGGGTCATGGCAGGGGTCAAGTGGGGTGCTAG

Function

NR:

description
PREDICTED: pyruvate carboxylase, mitochondrial-like

GO: NA

KEGG:

id description
K01959 pycA; pyruvate carboxylase subunit A

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015370 True 1434 mRNA 0.64 10 8552798 8572065

Neighbor

gene id symbol gene type direction distance location
AMCG00015369 sart1,LOC107568296 coding upstream 28239 8514713 ~ 8524559 (+)
AMCG00015364 NA coding upstream 108904 8433483 ~ 8443894 (+)
AMCG00015357 NA coding upstream 171621 8372466 ~ 8381177 (+)
AMCG00015346 NA coding upstream 288630 8259173 ~ 8264168 (+)
AMCG00015344 ehd1b,LOC107720605,LOC107548869,LOC107718765,LOC107701170,LOC107555151 coding upstream 328025 8215015 ~ 8224773 (+)
AMCG00015378 LOC105028067,LOC106563498,LOC106603157,LOC108412801,LOC108278882 coding downstream 19851 8591916 ~ 8596613 (+)
AMCG00015377 fkbp2,LOC106603154 coding downstream 36785 8608850 ~ 8612864 (+)
AMCG00015376 NA coding downstream 55706 8627771 ~ 8655109 (+)
AMCG00015381 NA coding downstream 157909 8729974 ~ 8731761 (+)
AMCG00015383 NA coding downstream 163896 8735961 ~ 8742485 (+)
G97383 NA non-coding upstream 72261 8477222 ~ 8480537 (+)
G97350 NA non-coding upstream 302513 8248111 ~ 8250285 (+)
G97347 NA non-coding upstream 307811 8242777 ~ 8244987 (+)
G97293 NA non-coding upstream 423909 8126775 ~ 8128889 (+)
G97284 NA non-coding upstream 436246 8114916 ~ 8116552 (+)
G97543 NA non-coding downstream 41190 8613255 ~ 8616320 (+)
G97547 NA non-coding downstream 52024 8624089 ~ 8624687 (+)
G97560 NA non-coding downstream 120363 8692428 ~ 8692642 (+)
G97588 NA non-coding downstream 147176 8719241 ~ 8719562 (+)
G97612 NA non-coding downstream 205152 8777217 ~ 8779046 (+)
G97513 NA other upstream 8016 8543324 ~ 8544782 (+)
AMCG00015368 banf1,LOC108439777,LOC106523121 other upstream 19394 8529018 ~ 8533404 (+)
AMCG00015365 naa40,LOC107750594,LOC107691908,LOC107749810 other upstream 119706 8342493 ~ 8433092 (+)
AMCG00015363 NA other upstream 140917 8382669 ~ 8411881 (+)
AMCG00015359 NA other upstream 240599 8307580 ~ 8312199 (+)
G97558 LOC107567908,LOC108428058,LOC107715375,LOC107568312,LOC108278532 other downstream 114703 8686768 ~ 8687680 (+)
AMCG00015412 NA other downstream 225006 8797071 ~ 9124271 (+)
AMCG00015397 NA other downstream 256671 8828736 ~ 8893016 (+)
AMCG00015390 NA other downstream 305227 8877292 ~ 8884897 (+)
AMCG00015396 NA other downstream 379671 8951736 ~ 8953684 (+)

Expression


Co-expression Network