AMCG00015377 (fkbp2,LOC106603154)


Basic Information

Item Value
gene id AMCG00015377
gene name fkbp2,LOC106603154
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 8608850 ~ 8612864 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015377
gagagagagagagagagagaggactttCTTGGCTCCAGTACGAGCTGCACGTTTACAAAGTTGGTGTCAGCGTTTTTGCAGTTCTTTTCTGGGCTAGAGTTGCCTAATCAGAGAGCGGATTAAAGatgcgGGTGTGTGTCGTGGCGATggccctcctctccctctccccgctGTGTCTGGGCAGCGAGGGCAAGAAAAAGCTGCAGATCGGCATCAAGAAACGCGTGGACAACTGTCCCGTCAAGTCACGCAAGGGCGACGTGCTGCACATGCACTACactGGAAAGCTGGAGGACGGGACTGAGTTTGACAGCAGCATCCCCAGGAACCAGCCCTTCACCTTCACCCTGGGCACCGGCCAGGTCATCAAGGGCTGGGACCAGGGCCTGCTGGGgaTGTGTGAAGGAGAGAAGAGGAAGCTGGTGATCCCCTCTGAGCTTGGTTATGGAGACAGAGGCGCCCCCCCCAAGATCCCAGGTGGTGCGACGCTCATTTTCGAAGTGGAGTTGCTGACAATCGAGCGCAGGTCCGACCTCTGAAGCTCTGACTGCAATGAGAGGTTCGGACATGGGGCAGCGTctgtcccccaccccccgcctCCTGTCCCTGACCCACACTGGGAGTGGTAGGAGGTAGGGGGGGTGTAGAAGAGACAATTCCAAATCTCCAAACATTCATTCCCAGATTCTCATCGctgtcaattattattattattttgtaattcttaCAGTCGGGAATTGCAGGAAAAAGTCTAAATCTAATGCCACCAATTCTTgacctggaaaataaaaaagcacttgaattataataatgaaaaataaaaaataaagtgtctaCCTAAGA

Function

symbol description
fkbp2 Predicted to enable peptidyl-prolyl cis-trans isomerase activity. Orthologous to human FKBP2 (FKBP prolyl isomerase 2).

NR:

description
PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP2-like isoform X2

GO:

id name namespace
GO:0000413 protein peptidyl-prolyl isomerization biological_process
GO:0006457 protein folding biological_process
GO:0003755 peptidyl-prolyl cis-trans isomerase activity molecular_function

KEGG:

id description
K09569 FKBP2; FK506-binding protein 2

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015377 True 843 mRNA 0.52 7 8608850 8612864

Neighbor

gene id symbol gene type direction distance location
AMCG00015378 LOC105028067,LOC106563498,LOC106603157,LOC108412801,LOC108278882 coding upstream 12237 8591916 ~ 8596613 (+)
AMCG00015370 LOC102776143 coding upstream 36785 8552798 ~ 8572065 (+)
AMCG00015369 sart1,LOC107568296 coding upstream 84291 8514713 ~ 8524559 (+)
AMCG00015364 NA coding upstream 164956 8433483 ~ 8443894 (+)
AMCG00015357 NA coding upstream 227673 8372466 ~ 8381177 (+)
AMCG00015376 NA coding downstream 14907 8627771 ~ 8655109 (+)
AMCG00015381 NA coding downstream 117110 8729974 ~ 8731761 (+)
AMCG00015383 NA coding downstream 123097 8735961 ~ 8742485 (+)
AMCG00015382 NA coding downstream 136023 8748887 ~ 8753046 (+)
AMCG00015391 arl2 coding downstream 185369 8798233 ~ 8800278 (+)
G97383 NA non-coding upstream 128313 8477222 ~ 8480537 (+)
G97350 NA non-coding upstream 358565 8248111 ~ 8250285 (+)
G97347 NA non-coding upstream 363863 8242777 ~ 8244987 (+)
G97293 NA non-coding upstream 479961 8126775 ~ 8128889 (+)
G97284 NA non-coding upstream 492298 8114916 ~ 8116552 (+)
G97543 NA non-coding downstream 391 8613255 ~ 8616320 (+)
G97547 NA non-coding downstream 11225 8624089 ~ 8624687 (+)
G97560 NA non-coding downstream 79564 8692428 ~ 8692642 (+)
G97588 NA non-coding downstream 106377 8719241 ~ 8719562 (+)
G97612 NA non-coding downstream 164353 8777217 ~ 8779046 (+)
G97513 NA other upstream 64068 8543324 ~ 8544782 (+)
AMCG00015368 banf1,LOC108439777,LOC106523121 other upstream 75446 8529018 ~ 8533404 (+)
AMCG00015365 naa40,LOC107750594,LOC107691908,LOC107749810 other upstream 175758 8342493 ~ 8433092 (+)
AMCG00015363 NA other upstream 196969 8382669 ~ 8411881 (+)
AMCG00015359 NA other upstream 296651 8307580 ~ 8312199 (+)
G97558 LOC107567908,LOC108428058,LOC107715375,LOC107568312,LOC108278532 other downstream 73904 8686768 ~ 8687680 (+)
AMCG00015412 NA other downstream 184207 8797071 ~ 9124271 (+)
AMCG00015397 NA other downstream 215872 8828736 ~ 8893016 (+)
AMCG00015390 NA other downstream 264428 8877292 ~ 8884897 (+)
AMCG00015396 NA other downstream 338872 8951736 ~ 8953684 (+)

Expression


Co-expression Network