Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00015383 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030132.1 |
| NCBI id | CM030132.1 |
| chromosome length | 32980562 |
| location | 8735961 ~ 8742485 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0019825 | oxygen binding | molecular_function |
| id | description |
|---|---|
| ko04612 | Antigen processing and presentation |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00015383 | True | 655 | mRNA | 0.60 | 7 | 8735961 | 8742485 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00015381 | NA | coding | upstream | 4200 | 8729974 ~ 8731761 (+) |
| AMCG00015376 | NA | coding | upstream | 80852 | 8627771 ~ 8655109 (+) |
| AMCG00015377 | fkbp2,LOC106603154 | coding | upstream | 123097 | 8608850 ~ 8612864 (+) |
| AMCG00015378 | LOC105028067,LOC106563498,LOC106603157,LOC108412801,LOC108278882 | coding | upstream | 139348 | 8591916 ~ 8596613 (+) |
| AMCG00015370 | LOC102776143 | coding | upstream | 163896 | 8552798 ~ 8572065 (+) |
| AMCG00015382 | NA | coding | downstream | 6402 | 8748887 ~ 8753046 (+) |
| AMCG00015391 | arl2 | coding | downstream | 55748 | 8798233 ~ 8800278 (+) |
| AMCG00015389 | LOC102775858 | coding | downstream | 59942 | 8802427 ~ 8809201 (+) |
| AMCG00015392 | NA | coding | downstream | 83027 | 8825512 ~ 8831714 (+) |
| AMCG00015395 | NA | coding | downstream | 184017 | 8926502 ~ 8929776 (+) |
| G97588 | NA | non-coding | upstream | 16399 | 8719241 ~ 8719562 (+) |
| G97560 | NA | non-coding | upstream | 43319 | 8692428 ~ 8692642 (+) |
| G97547 | NA | non-coding | upstream | 111274 | 8624089 ~ 8624687 (+) |
| G97543 | NA | non-coding | upstream | 119641 | 8613255 ~ 8616320 (+) |
| G97383 | NA | non-coding | upstream | 255424 | 8477222 ~ 8480537 (+) |
| G97612 | NA | non-coding | downstream | 34732 | 8777217 ~ 8779046 (+) |
| G97618 | NA | non-coding | downstream | 41261 | 8783746 ~ 8783991 (+) |
| G97619 | NA | non-coding | downstream | 41727 | 8784212 ~ 8785276 (+) |
| G97620 | NA | non-coding | downstream | 47075 | 8789560 ~ 8790667 (+) |
| G97640 | NA | non-coding | downstream | 169529 | 8912014 ~ 8964118 (+) |
| G97558 | LOC107567908,LOC108428058,LOC107715375,LOC107568312,LOC108278532 | other | upstream | 48281 | 8686768 ~ 8687680 (+) |
| G97513 | NA | other | upstream | 191179 | 8543324 ~ 8544782 (+) |
| AMCG00015368 | banf1,LOC108439777,LOC106523121 | other | upstream | 202557 | 8529018 ~ 8533404 (+) |
| AMCG00015365 | naa40,LOC107750594,LOC107691908,LOC107749810 | other | upstream | 302869 | 8342493 ~ 8433092 (+) |
| AMCG00015412 | NA | other | downstream | 54586 | 8797071 ~ 9124271 (+) |
| AMCG00015397 | NA | other | downstream | 86251 | 8828736 ~ 8893016 (+) |
| AMCG00015390 | NA | other | downstream | 134807 | 8877292 ~ 8884897 (+) |
| AMCG00015396 | NA | other | downstream | 209251 | 8951736 ~ 8953684 (+) |
| AMCG00015398 | NA | other | downstream | 228981 | 8971466 ~ 8978004 (+) |
