Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00015391 |
| gene name | arl2 |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030132.1 |
| NCBI id | CM030132.1 |
| chromosome length | 32980562 |
| location | 8798233 ~ 8800278 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| symbol | description |
|---|---|
| arl2 | Predicted to enable GTP binding activity. Predicted to be involved in protein folding. Predicted to be active in cytoplasm and microtubule cytoskeleton. Orthologous to human ARL2 (ADP ribosylation factor like GTPase 2). |
| description |
|---|
| PREDICTED: ADP-ribosylation factor-like protein 2 |
| id | name | namespace |
|---|---|---|
| GO:0007264 | small GTPase mediated signal transduction | biological_process |
| GO:0005622 | intracellular anatomical structure | cellular_component |
| GO:0005525 | GTP binding | molecular_function |
| id | description |
|---|---|
| K07943 | ARL2; ADP-ribosylation factor-like protein 2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00015391 | True | 1231 | mRNA | 0.49 | 5 | 8798233 | 8800278 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00015382 | NA | coding | upstream | 45187 | 8748887 ~ 8753046 (+) |
| AMCG00015383 | NA | coding | upstream | 55748 | 8735961 ~ 8742485 (+) |
| AMCG00015381 | NA | coding | upstream | 66472 | 8729974 ~ 8731761 (+) |
| AMCG00015376 | NA | coding | upstream | 143124 | 8627771 ~ 8655109 (+) |
| AMCG00015377 | fkbp2,LOC106603154 | coding | upstream | 185369 | 8608850 ~ 8612864 (+) |
| AMCG00015389 | LOC102775858 | coding | downstream | 2149 | 8802427 ~ 8809201 (+) |
| AMCG00015392 | NA | coding | downstream | 25234 | 8825512 ~ 8831714 (+) |
| AMCG00015395 | NA | coding | downstream | 126224 | 8926502 ~ 8929776 (+) |
| AMCG00015399 | NA | coding | downstream | 164182 | 8964460 ~ 8965650 (+) |
| AMCG00015406 | NA | coding | downstream | 256495 | 9056773 ~ 9063476 (+) |
| G97620 | NA | non-coding | upstream | 7566 | 8789560 ~ 8790667 (+) |
| G97619 | NA | non-coding | upstream | 12957 | 8784212 ~ 8785276 (+) |
| G97618 | NA | non-coding | upstream | 14242 | 8783746 ~ 8783991 (+) |
| G97612 | NA | non-coding | upstream | 19187 | 8777217 ~ 8779046 (+) |
| G97588 | NA | non-coding | upstream | 78671 | 8719241 ~ 8719562 (+) |
| G97640 | NA | non-coding | downstream | 111736 | 8912014 ~ 8964118 (+) |
| G97650 | NA | non-coding | downstream | 142146 | 8942424 ~ 8950080 (+) |
| G97663 | vps51 | non-coding | downstream | 183224 | 8983502 ~ 8984908 (+) |
| G97676 | NA | non-coding | downstream | 224367 | 9024645 ~ 9030399 (+) |
| G97623 | NA | non-coding | downstream | 267665 | 9067943 ~ 9072295 (+) |
| G97558 | LOC107567908,LOC108428058,LOC107715375,LOC107568312,LOC108278532 | other | upstream | 110553 | 8686768 ~ 8687680 (+) |
| G97513 | NA | other | upstream | 253451 | 8543324 ~ 8544782 (+) |
| AMCG00015368 | banf1,LOC108439777,LOC106523121 | other | upstream | 264829 | 8529018 ~ 8533404 (+) |
| AMCG00015365 | naa40,LOC107750594,LOC107691908,LOC107749810 | other | upstream | 365141 | 8342493 ~ 8433092 (+) |
| AMCG00015397 | NA | other | downstream | 28458 | 8828736 ~ 8893016 (+) |
| AMCG00015390 | NA | other | downstream | 77014 | 8877292 ~ 8884897 (+) |
| AMCG00015396 | NA | other | downstream | 151458 | 8951736 ~ 8953684 (+) |
| AMCG00015398 | NA | other | downstream | 171188 | 8971466 ~ 8978004 (+) |
| AMCG00015407 | slc25a45 | other | downstream | 229279 | 9029557 ~ 9036615 (+) |
