AMCG00015392


Basic Information

Item Value
gene id AMCG00015392
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 8825512 ~ 8831714 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015392
ATGGACCTCGACTGCCCAGACAGCCAGCCCTGCCCCGATTCCCCACCTCATAGCTGCCCCTACCCACTGTACGAGCGCCCCCCCCGGGCTCCCTCCTACCCCTACCCCCTCCCCTCCAGCTCCCTCATCTCCCGGCTGCTCCAGGGAAGCACGGACGGGAGCGGCCGCAGTCCCGGGGCTGGCCAGGAGGGCAGTGCTGTGGGGGAGAGGTTTGGGGGCTGCAATTCAGAGGACGAGGAAgaagtggaggaggagggggaggaggaagagggggaggggatggGAAAAAGGGGAGCCTGCACAGAGGTGGAGGTGCTGTACCAGGAGTTCCTGCGAGTGAAGAGAGCCAGGGTGGAGAGTATAGTCCGGGGCATAGAGAGCCAGGGAGAGGGgcaggtgggggagggggggagggaggggtggcGGCTCCTGGAGGGAGAAGGGAGGGGCGAGgaggcagggaggagaggaggaagaggaggagaggaagggaggagtaggaggcagagggagaggtggGAACTGAAGAGCCAGTTGGAGAGCATGAGGGAGCAGCTCTTCCAGTTGCAGGAGAAAGTTTTGGAGATGTATGGtgggagggagaaagggagaggcagagggagagggagaggcagggaggcgAGGGAggagagggcgagagagagggagctgttttccgaggaggaggaggaagaagaggaggaggaggaggaggaggtgggaggagaggaggaggaagaagaaggagtGAGCTCCCGGTTTCAGCTCTCTGACCCCGACTCTCTGGGGTTCGGCGGGGGCGGGGCGGGGATACTGGCCAGAGCCTGTGCCCAGCTGGGGGGCGAGGCCGGGGCCGGGCCCAAGCTGGCCGCCGCCCTGAAGGAGGAGCTGGGGGCAGCGGTGGCGCAAGTAATCGACGGCGTGGTGCGCCTCTACTCGGCCGATCCTGGGCCACCCCAGCCTGCCCACTCCCACGGCCTTCCCccggcctcctcctcctcctcctcctccccgccgcccccacccccacgcCCCATGGAGGACAGGTATTTCGGGGGCGGGGCCttacaggagagagaggggcggcAGTTTTACACCGAGCAGCAGGAGGCGCTCCCGCTGGTGATGGAGAAGTTCGCCCGGCAGGCGGTGGGTGAGGGGGTGGCGGCCGCCGAGGTGCTGACCTTGCGCCACGACTCCGAGCTTGTCCGCGTCCTCAGCCTGCACTACAACAAGAGCAGTGACTACCAGATCCCAGCACGGTTCTTGGAAGTGGCAGAGGTCACTCTGAGGGAGTTCTTCACTGCTGTCCAGTCTGGCCGTGACACTGACCCCTCCTGGAAGAAGAGCATCTACAAGGTCATCTGCAAGCTGGATAGCGAGGTGCCTGAGCTCTTCAAGACCCCTGGCTGCCCACAGGACCCTGGGCACGATGGACACACTGACCGCCCGCCCAATTCAGACCCTGGACTCTACACATCGCCATCTGTGGGCAGCGTGGTGAAGCgatgctggctggctggctggcaggGCGTGTGGAAGTCCATCTGGGGCCCCGGCACCGGCTACTCCTCCCCCGCTCCTCTCCTCCAGGTGCACAGCGAGCGAGCCCTGGGCTGGACTGGTCCCGGCGCGGACACAGAGTCTGTGACTGCCCAGAGCTGGGCTGCCCCTGCTGCcaccatgtgtgtgttttggaAGGTGAGCTGCCGGTGCGCCCAGCGCCAGTCCTCCTCTCGCTGTGTGCGCTGTGCCTTCTCCACCGCCTCCGCCAGGCCCGGGAACGAGCGCACCGAGGACGACACCGGGGCCCACAGCACGTGCCTGAGAGAGTGGGGGGACAGAGGGTGA

Function

GO:

id name namespace
GO:0006355 regulation of transcription, DNA-templated biological_process
GO:0007275 multicellular organism development biological_process
GO:0005634 nucleus cellular_component
GO:0003677 DNA binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015392 True 1851 mRNA 0.66 5 8825512 8831714

Neighbor

gene id symbol gene type direction distance location
AMCG00015389 LOC102775858 coding upstream 16311 8802427 ~ 8809201 (+)
AMCG00015391 arl2 coding upstream 25234 8798233 ~ 8800278 (+)
AMCG00015382 NA coding upstream 72466 8748887 ~ 8753046 (+)
AMCG00015383 NA coding upstream 83027 8735961 ~ 8742485 (+)
AMCG00015381 NA coding upstream 93751 8729974 ~ 8731761 (+)
AMCG00015395 NA coding downstream 94788 8926502 ~ 8929776 (+)
AMCG00015399 NA coding downstream 132746 8964460 ~ 8965650 (+)
AMCG00015406 NA coding downstream 225059 9056773 ~ 9063476 (+)
AMCG00015413 NA coding downstream 296321 9128035 ~ 9138925 (+)
AMCG00015414 NA coding downstream 307490 9139204 ~ 9139449 (+)
G97620 NA non-coding upstream 34845 8789560 ~ 8790667 (+)
G97619 NA non-coding upstream 40236 8784212 ~ 8785276 (+)
G97618 NA non-coding upstream 41521 8783746 ~ 8783991 (+)
G97612 NA non-coding upstream 46466 8777217 ~ 8779046 (+)
G97588 NA non-coding upstream 105950 8719241 ~ 8719562 (+)
G97640 NA non-coding downstream 80300 8912014 ~ 8964118 (+)
G97650 NA non-coding downstream 110710 8942424 ~ 8950080 (+)
G97663 vps51 non-coding downstream 151788 8983502 ~ 8984908 (+)
G97676 NA non-coding downstream 192931 9024645 ~ 9030399 (+)
G97623 NA non-coding downstream 236229 9067943 ~ 9072295 (+)
G97558 LOC107567908,LOC108428058,LOC107715375,LOC107568312,LOC108278532 other upstream 137832 8686768 ~ 8687680 (+)
G97513 NA other upstream 280730 8543324 ~ 8544782 (+)
AMCG00015368 banf1,LOC108439777,LOC106523121 other upstream 292108 8529018 ~ 8533404 (+)
AMCG00015365 naa40,LOC107750594,LOC107691908,LOC107749810 other upstream 392420 8342493 ~ 8433092 (+)
AMCG00015390 NA other downstream 45578 8877292 ~ 8884897 (+)
AMCG00015396 NA other downstream 120022 8951736 ~ 8953684 (+)
AMCG00015398 NA other downstream 139752 8971466 ~ 8978004 (+)
AMCG00015407 slc25a45 other downstream 197843 9029557 ~ 9036615 (+)
AMCG00015445 LOC102291110,LOC108440839,LOC107679294,LOC107731944,LOC102201806,LOC102799004,LOC108268318,LOC107558438,LOC570544 other downstream 792875 9624589 ~ 9631892 (+)

Expression


Co-expression Network