AMCG00015399


Basic Information

Item Value
gene id AMCG00015399
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 8964460 ~ 8965650 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015399
ATGTCGAGCTCGGTTCGCCGGGGGCTGATGGCAGCCTATAGGTGTTTATCCTCGGCGAGAACACTGCCTGGTATCGGGGGCCGAGTACAGGTGCGTAAAGGCGGTAAGCGACTGATCCCGCCCAGCTGTGTACCCACGCCCCCTAAGCACACTGGCCCCACCCCCTCAGGGTGGACCCCACCCCCAGACGTGCCCCCCTCTCTTCCCTACATGGTGCGCCGGTCCCGCATGCACAACATCCCGGTCTACAGTGACATCACCCATGGCAACCGGCACATGACCCTGGTGAGGAAGATCGAGGGTGACATCTGGGCCCTTGAGCAGGAAGTGAAGCAGCACCTGGCCAAGCTGACGGGGAAGAGCCCACCCACACAGGTCAACGAGGTCACTGGGAGCATCCGGGTCAAAGGTCAATTCGACAAGGAGCTGAAAGCCTGGCTGGTGAAGAAGGGCTTCTAA

Function

GO: NA

KEGG:

id description
K17430 MRPL49, NOF1; large subunit ribosomal protein L49

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015399 True 459 mRNA 0.61 4 8964460 8965650

Neighbor

gene id symbol gene type direction distance location
AMCG00015395 NA coding upstream 34684 8926502 ~ 8929776 (+)
AMCG00015392 NA coding upstream 132746 8825512 ~ 8831714 (+)
AMCG00015389 LOC102775858 coding upstream 155259 8802427 ~ 8809201 (+)
AMCG00015391 arl2 coding upstream 164182 8798233 ~ 8800278 (+)
AMCG00015382 NA coding upstream 211414 8748887 ~ 8753046 (+)
AMCG00015406 NA coding downstream 91123 9056773 ~ 9063476 (+)
AMCG00015413 NA coding downstream 162385 9128035 ~ 9138925 (+)
AMCG00015414 NA coding downstream 173554 9139204 ~ 9139449 (+)
AMCG00015416 NA coding downstream 189848 9155498 ~ 9175483 (+)
AMCG00015417 NA coding downstream 292532 9258182 ~ 9261673 (+)
G97640 NA non-coding upstream 342 8912014 ~ 8964118 (+)
G97650 NA non-coding upstream 14380 8942424 ~ 8950080 (+)
G97620 NA non-coding upstream 173793 8789560 ~ 8790667 (+)
G97619 NA non-coding upstream 179184 8784212 ~ 8785276 (+)
G97618 NA non-coding upstream 180469 8783746 ~ 8783991 (+)
G97663 vps51 non-coding downstream 17852 8983502 ~ 8984908 (+)
G97676 NA non-coding downstream 58995 9024645 ~ 9030399 (+)
G97623 NA non-coding downstream 102293 9067943 ~ 9072295 (+)
G97737 NA non-coding downstream 254186 9219836 ~ 9220284 (+)
G97741 sf3b2 non-coding downstream 256986 9222636 ~ 9223257 (+)
AMCG00015396 NA other upstream 10776 8951736 ~ 8953684 (+)
AMCG00015397 NA other upstream 71444 8828736 ~ 8893016 (+)
AMCG00015390 NA other upstream 79563 8877292 ~ 8884897 (+)
G97558 LOC107567908,LOC108428058,LOC107715375,LOC107568312,LOC108278532 other upstream 276780 8686768 ~ 8687680 (+)
G97513 NA other upstream 419678 8543324 ~ 8544782 (+)
AMCG00015398 NA other downstream 5816 8971466 ~ 8978004 (+)
AMCG00015407 slc25a45 other downstream 63907 9029557 ~ 9036615 (+)
AMCG00015445 LOC102291110,LOC108440839,LOC107679294,LOC107731944,LOC102201806,LOC102799004,LOC108268318,LOC107558438,LOC570544 other downstream 658939 9624589 ~ 9631892 (+)
G98000 NA other downstream 740447 9706097 ~ 9710729 (+)
G98025 NA other downstream 791423 9757073 ~ 9760688 (+)

Expression


Co-expression Network