AMCG00015406


Basic Information

Item Value
gene id AMCG00015406
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 9056773 ~ 9063476 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015406
CACATTTTGGCCAGTGGATGCGTGACCTGGTGACGTGTTTTCCGGCTGAGTTCACGCAGACGTCCAACTTGGACAGGTTTGTCGCAGATTCTGCGCAGACTCGGCAAAGTATGCGTGTCGTGAACGCAGCCGATGTTTCCAACTTGTCAACGTCATCAACAGGCGACCTTCCCGGAAGAGACGTGGCAAGTGAAGTCGACAGATCCGAAGCAGGACAAAAACCCtaaaaacaagaagaagaagaagaagaagaaacaaaaaatcactTCCACAGAATATCTCACAGATATTTCTAGAGTCGAAGCCTCTTGTACTGcaaggaaaacaagaacaacaagccCAGCAACGCAATAAGTGACAGACGCTGCCTGGTGGGACCATGGGTCTGTGCAAGTGTCCGAAGCGGAAGGTGACCAACCTGTTCTGTTTCGAGCACCGCGTCAACGTGTGTGAGCACTGCCTGGTGTCCAACCATGCCAAGtgtaTAGTGCAGTCCTATCTCCAGTGGCTCCAGGACAGTGACTACAACCCCAACTGCCGCCTGTGCAGCACTCCCCTGGCATCCCAGGACACTGTGCGGCTTGTTTGCTATGaTGTGTTCCACTGGTCCTGCTTGAACGAACTAGCCGCCAGGCTGCCCCCCAACACCGCACCCGCCGGTTACCAGTGCCCCAGCTGCCAAGGGCCCGTCTTCCCGCCTACCAACCTGGCCAGCCCTGTAGCCGATGTCCTGAGGGACACTCTGTCCTCTGTCAACTGGGCCCGGGCGGGGCTCGGCCTGCCGCTGATTGAGGAGACAGCCAGGCAGGAGGTGGGCTCAAATGACACTACGGACTACACCAATTGGTCCTCATTCGACACCTCTGGGGTCCAGGCCAGTGATGTCCACTCTGTCCAGCAGGCCTCGGGCCTGTCTTACAGCTCGAACCCGAGCCCGTCCCCCCAGGCCGACTACGGGGCCGCCCTCAATAATGGGGGGGTCGGCGAGGTCCACTCCGTCATCAACATGACCTCGGAAGTGGCCAGCGACTCCATCACCATCCACACAGcctccTCTCCCAGGAAGTTGTATGACACGCGGGACGCCTCTCGCTCCTCGGTGATGCAGGTCGACTTCGACGATGACAAGTACCGGCGCCGGCCTGCTCTGGGCTGGTTTGCTCAGCTGCTCAGGAGCCGGTCGGGCACAAAGCGGACAGCCCTGACCCTGAGACAGCGggtcttgctgctgctgctgctgggcgtCCTGGGCTTCCTCACGCTCATCGTGGTGATGTCCAAGCTGGGCCGTGCCTCGGCCGACAGCGACCCCAACCTCGACCCCCTCCTCAACCCCCACATCCGCGTGGGCAACAACTAACTGCCCCGCCCTGCTGGGGTGGCGGGGCGGGGCGGTGGGGGATGCAGGATGGACAGAAAGAGGAAGAACAGGAGAGGTTTGTTCTGGACACTGGAAACCGGAAACAGGACATTGCAAACTGGGCTAGGCTGTGCTGTACTGGGTGGGTATGTGCTGTCGTGGGTTAGACTGTATTTAGCTCcactctactgtactgcactgcactggccAGTCAGTGTGCGCTGCGTTGGACACTAATAATGGGAGCTGAGTGGGTTGGGGCGAGGGGGAGGgcgagggggag

Function

GO:

id name namespace
GO:0008270 zinc ion binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015406 True 1643 mRNA 0.59 8 9056773 9063476

Neighbor

gene id symbol gene type direction distance location
AMCG00015399 NA coding upstream 91123 8964460 ~ 8965650 (+)
AMCG00015395 NA coding upstream 126997 8926502 ~ 8929776 (+)
AMCG00015392 NA coding upstream 225059 8825512 ~ 8831714 (+)
AMCG00015389 LOC102775858 coding upstream 247572 8802427 ~ 8809201 (+)
AMCG00015391 arl2 coding upstream 256495 8798233 ~ 8800278 (+)
AMCG00015413 NA coding downstream 64559 9128035 ~ 9138925 (+)
AMCG00015414 NA coding downstream 75728 9139204 ~ 9139449 (+)
AMCG00015416 NA coding downstream 92022 9155498 ~ 9175483 (+)
AMCG00015417 NA coding downstream 194706 9258182 ~ 9261673 (+)
AMCG00015426 LOC104961656,LOC102799013,LOC103359705,LOC106918378 coding downstream 260079 9323555 ~ 9326614 (+)
G97676 NA non-coding upstream 26374 9024645 ~ 9030399 (+)
G97663 vps51 non-coding upstream 71865 8983502 ~ 8984908 (+)
G97640 NA non-coding upstream 92655 8912014 ~ 8964118 (+)
G97650 NA non-coding upstream 106693 8942424 ~ 8950080 (+)
G97620 NA non-coding upstream 266106 8789560 ~ 8790667 (+)
G97623 NA non-coding downstream 4467 9067943 ~ 9072295 (+)
G97737 NA non-coding downstream 156360 9219836 ~ 9220284 (+)
G97741 sf3b2 non-coding downstream 159160 9222636 ~ 9223257 (+)
G97745 NA non-coding downstream 174357 9237833 ~ 9238342 (+)
G97730 NA non-coding downstream 257566 9321042 ~ 9321684 (+)
AMCG00015407 slc25a45 other upstream 20158 9029557 ~ 9036615 (+)
AMCG00015398 NA other upstream 78769 8971466 ~ 8978004 (+)
AMCG00015396 NA other upstream 103089 8951736 ~ 8953684 (+)
AMCG00015397 NA other upstream 163757 8828736 ~ 8893016 (+)
AMCG00015390 NA other upstream 171876 8877292 ~ 8884897 (+)
AMCG00015445 LOC102291110,LOC108440839,LOC107679294,LOC107731944,LOC102201806,LOC102799004,LOC108268318,LOC107558438,LOC570544 other downstream 561113 9624589 ~ 9631892 (+)
G98000 NA other downstream 642621 9706097 ~ 9710729 (+)
G98025 NA other downstream 693597 9757073 ~ 9760688 (+)
G98053 NA other downstream 752242 9815718 ~ 9872005 (+)
AMCG00015456 NA other downstream 788196 9851672 ~ 9862136 (+)

Expression


Co-expression Network