AMCG00015413


Basic Information

Item Value
gene id AMCG00015413
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 9128035 ~ 9138925 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015413
GCGCACTGCGCCCCGCCGCTGCCAACACACAGGTCTTCTATGTTTTGATGTCGGCAGCAAAGGAGGCGAGATGTGGTCCTTTTTCGCTCGGGATCCCGTCAAAGACTTTCCGTACGAGATCTTACCGGACACCCAGGAGCCGGCCGGGATATGGACTCTGCACCGGGGAAAGCGGAAGgtgacTGGGGAGCcggtgtcagtgtttgtgttcgAGCTGCGCCCTGGCGGCGAGGAGCAGATGGCAACGGACAAGTCTCTGTATGTGGTGACGGAGCCCGTGACCCCCCTCTCTGCCCACCTGAAGGCGCAAGCGGAGGCAGGGGGTGCCAAAGAGCTGGAGGTGTCCTGGGGGCTGCATCAGATCGTGAAAGCCCTCAGTTTCGTGGTGAACGACTGCCACCTGTTGCACAATGACCTGGGGCTGTGGTCGGTTTTTGTGGACCGTGCTGGGGAGTGGAAGCTGGGGGGGCTGGAGCACATGACATCCAGCCAGGGCGACGCCCTCCCCAGCAGGCGGCAGACACCTGACCTGGAGAACTTCGTGGAGACCAACCTGTTCCTGGAGGAGATCCAGaTCAAGGACCCAGCAGAGAAGCAGAAATTCTTCCAGGCTCTGAGTGACGACCTGGACTCGTTCCCTGAGGATTTCTGCCGGCACAAGGTGCTCCCACAGCTGCTCACCGCCTTTGAGTTCGGCAATGCCGGCGCCGTCATCCTCACCCCACTCTTCAAGGTAGGGAAGCTCCTCAGTGGGGAAGAGTACCAGCAGAAGATCATCCCAGTCATTGTGAAGATGTTCTCCTCCACAGACAGAGCCATGCGCATCCGgctgctgcagcagatgGAGCAGTTTATTCAATTCCTGAACGAGGCGGCAGTGAACTCCCAGATCTTCCCCCACCTGAACGAGGCGAATCTCAACATGGAGCTCATGCGCCACTTCGCCCGCCTGCAGGCCCGTGACGACCAGGGCCCCATCCGCTGCAACACCACCGTCTGGGCGGGCTGGGCCGTCACGGGGGTCTCATCCCTGACCTCCAAGCTCATCCGCACCGCCCCTGGGGCCGCAGAGGGGGGGGGTGCTCCCGACATCGCCCCTCCTACCCCCCCCTCCGCTGCCGCCACTGCTCCTGCCGCCACCGTCCCCGCCCCCGCAGGGTCCCCCCAGGACGGCCGGGGCCGAGGGTTTGAAACTCAGAAGGACACGCCCCGGCCCGCCCCTTCCACCCTCATTGACCAGTGGGCTGCCGCCAAGGgagtggaggaagaggaggagccaGTGAGCGACCGCTGGGAGGATGAGGATTGGGGGAGCCTGGAGGTGGGCGGGTCCTCCTCCACCGCCATGAAGAAACAGAGCTCTGATTGGAGCAGCTCGGGCTGGGAAGCGGATGACAGCTGGTCCAATGAGAAGGAGGCAGAAGGGCACAGTCAGAGCTCGCCGGGGGAGGAGGGCTGGGGGCAGGAGTGGGAGGACGACCTGGGCTCGCAGGGGGAGGCACCCTCGTCGTCGTCCGCAGCGCCCACTGCCACGGGCCCCCCACTGCCTGAGGGCACGAGGCCAGCCAGCGAGTATAACTGGGAGAGCGGGGCAGGGGGCGCCGTCGGGGGCTCCCAGACTGACTTCTTCTCTGGGATTTCACAGAGAGCGACCCCCGGGAACATgAAGAGTGAGGATACCTGGGGGGCAGACCctgggggggagtggggagCCGAGGACAACTGGGAGTCCCTGGAGGCCGATCAGGagagaggagaggaggaggaggaggaggaggaggagtag

Function

GO:

id name namespace
GO:0006468 protein phosphorylation biological_process
GO:0005524 ATP binding molecular_function
GO:0004672 protein kinase activity molecular_function

KEGG:

id description
K08876 SCYL1; SCY1-like protein 1

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015413 True 1786 mRNA 0.64 14 9128035 9138925

Neighbor

gene id symbol gene type direction distance location
AMCG00015406 NA coding upstream 64559 9056773 ~ 9063476 (+)
AMCG00015399 NA coding upstream 162385 8964460 ~ 8965650 (+)
AMCG00015395 NA coding upstream 198259 8926502 ~ 8929776 (+)
AMCG00015392 NA coding upstream 296321 8825512 ~ 8831714 (+)
AMCG00015389 LOC102775858 coding upstream 318834 8802427 ~ 8809201 (+)
AMCG00015414 NA coding downstream 279 9139204 ~ 9139449 (+)
AMCG00015416 NA coding downstream 16573 9155498 ~ 9175483 (+)
AMCG00015417 NA coding downstream 119257 9258182 ~ 9261673 (+)
AMCG00015426 LOC104961656,LOC102799013,LOC103359705,LOC106918378 coding downstream 184630 9323555 ~ 9326614 (+)
AMCG00015425 men1,LOC103391704 coding downstream 209660 9348585 ~ 9355717 (+)
G97623 NA non-coding upstream 55740 9067943 ~ 9072295 (+)
G97676 NA non-coding upstream 97636 9024645 ~ 9030399 (+)
G97663 vps51 non-coding upstream 143127 8983502 ~ 8984908 (+)
G97640 NA non-coding upstream 163917 8912014 ~ 8964118 (+)
G97650 NA non-coding upstream 177955 8942424 ~ 8950080 (+)
G97737 NA non-coding downstream 80911 9219836 ~ 9220284 (+)
G97741 sf3b2 non-coding downstream 83711 9222636 ~ 9223257 (+)
G97745 NA non-coding downstream 98908 9237833 ~ 9238342 (+)
G97730 NA non-coding downstream 182117 9321042 ~ 9321684 (+)
G97770 NA non-coding downstream 188711 9327636 ~ 9331026 (+)
AMCG00015412 NA other upstream 3764 8797071 ~ 9124271 (+)
AMCG00015407 slc25a45 other upstream 91420 9029557 ~ 9036615 (+)
AMCG00015398 NA other upstream 150031 8971466 ~ 8978004 (+)
AMCG00015396 NA other upstream 174351 8951736 ~ 8953684 (+)
AMCG00015397 NA other upstream 235019 8828736 ~ 8893016 (+)
AMCG00015445 LOC102291110,LOC108440839,LOC107679294,LOC107731944,LOC102201806,LOC102799004,LOC108268318,LOC107558438,LOC570544 other downstream 485664 9624589 ~ 9631892 (+)
G98000 NA other downstream 567172 9706097 ~ 9710729 (+)
G98025 NA other downstream 618148 9757073 ~ 9760688 (+)
G98053 NA other downstream 676793 9815718 ~ 9872005 (+)
AMCG00015456 NA other downstream 712747 9851672 ~ 9862136 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location