AMCG00015455


Basic Information

Item Value
gene id AMCG00015455
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 9816131 ~ 9819910 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015455
ATGTCCGCTGTTTTCGAAGGAGTGCCGCTGTCAGCGATGCAGTCCCCACAGCAGCTACACACCAACACCATCAGcccccaggAGCTGGCCCTGGAGATCAAGGCGTTCCTGAGCGGGGTGGACCAGACGCAGGGCCGCAAGCTTAGTGCACGTGACCATGCCAAGAGCGCCCTGCGGCTGCTGCGCCGCGTGCCCGCCTGCCGGGGGGCCGTGCTGGAGCACCTGCGGGGGGTGTACGACGAGCATGTGGCCGCCTACCTTCAGGAGCTGGAgggggagcgagagagggagagggagcgggagggcggaagaggaggaggaggaggaggtggaggaggtgggggaagGGGCGGAAGAGGTGGCATGAGCGTCTCCCTGGGCTTGGAAGACGTCATCCAGGAGATCCACGGCGTCCTGTCCGAGTTCATCCGGCTCAACCCCTCGGCCTGGGCGCCCCTGGTCTCGGCCTGGGCCATTGACCTGATGGGCCAACTGAGCAGCAAGTACTCGGGCCACCTGGGCGTCCCCCACGCGGCCAGCCTGAACGAGCTGCTGCAGCTGTGGATGGGCTGCTCGGCCACCCGCTCGCTGATGGAGAGCTACGCGCAGTGCCTGGCGGCGCTGATCGGCAGCTGCCCGGACGCCTGCGTGGACGCCCTGCTGGATACCTCGGTGCAGCACTCGCCGCACTTCGATTGGGTGGTGGCCCACATCGGTTCCTCCTTCCCCAACACCATCATCAGCCGCGTGCTCTCCTGTGGCCTCAAGGACTTCTGCGCCCACGCCCAGCACTCAGAGGTCGGCCAGGCCCCCTCCGCTGGCGCCACGCCCCCCTTGTCGGACAAGGTGGGCCGGGTTCCCAAGATCGGGTCGGTGGTGGGAATCCTGGGGCACCTGGCCTCGCGCCACTCGGACTCCATCCGGCAGGAGCTGCTGACCATGTTCCACGGGAGTCTCTCTGGCCCTCGTGAGCCCCAGCGCAAGGCCGCTGTGCCCTTCCTGCTGCAGCTGGCTGCCCTCTCCCCCCCGGCCTTGCTGGGGGCAGTGTCCGGGGACCTGGTGGACTCCCTGCGGCCACCCGTGCTGGGCCAGCTGCAGGCACTGCTGTCCGGCCTGCCACGCGAGGAGCTGGACAACATGACCAGCCTGGTGGTGCACCTGGTGTGTCAGAGCTCGGCCGGCGCGCTGCGGGTGCTGCAGTTCCTGGTCAACACCGCCATGCCTGCCTCCGTCATTATGGCTGCGCAGGGGCCGGCAGCAGTGCCCGAGGGCGCCAGGGAGACCTGCGACCGCGTGGTGCAGCTGCTACTCCTGCACCTGCAGAAACTGGTGTACAACCGGGCTGACGGTGACGACGATACCCCCAACCCCCAGCAGCTCGCCCCTGGCCCCcgccaccaccatcaccaccaccaccaccacggcCCCCCTCacgcctcctcctccccctcccccccccggGCCGTGCCCTTCCTGGATGCGCTGCGGCCCCACGTGCGGGAGCTGTGTGTCGAGACACTGCGGCTGGAGAGGAAGCGCCACCTGTGGCTGCACCAGCTGCTCAGCCTGCTGGCGGTGTACTGCGGCCCCAGTGTGGCCACCGAGGCCCTTTGCCACCTGCTGAGCCTGGCGCGGGTCCCCGAGGAGCTGGCCCTGGCCGCCCAGTTGCACAgtctgctctctgtctctctgcctggcCTGCTGCCCGCCGCCGTACAGCGCTGCGCTGCCCAAATCCACACCCAGAGCCTGGCCCCCACTGAGCTGGCCCAGTTGCTGCTCAACCTGGCCACCGTGGTGCAGAGCCAGGAGGATGAGGGAGCAGCGGGTGGAGGGGGCCCGGCATCCATGGCGGCCCAGGTCGGGGCAGCCGTCTCCAAGCACCTGCAGGACTTTAGCCCCCTGCTCCTGCACAGCGACCCGTCTGTCTCCCAGGCCGCCGCCCAGCTCCTTGCCGCCAGCCAGCTGCCCAGGGCGGTGCGGCCGGCCCACCTGCTGAACATCACCCGCGCTGCCGTGGCACACTTCTTCCTAGCTCTGCGCTgggagggcgagggcgagggtgaggcagagagggaggtggTGCGGGAGGCGGCGGTGAGCTGCTCGGTGCGTCTCCTCTCCCGCCTGGCAGCCTTCTCCCCGCTCACCCTGAAAGCCGTGTTGCAGCAGCTGGTGGAGGGGGGGCTGCACCGCGGACACGCACCTCTGTTTGGTGGTGGAGGGCGGGAGGATGGCGGCTGCCCCCCCTGGCCCTCAGACGCCCAtttctcctccacctcctcctcctcctcgtcctgcTCCCTACTGGAGACCAACCGCAAGTTCGGCACCACGGTCAACTTCTCGGGCGGCGTGTGGTCAGTTTTCCACGCTGGCGTGATCGGGGAGGGGCCGCAACCACCTCCTGCCACCCCGCCCCCCGCCGCTGCCCGGGTGCTAGCCAACCTGCAGACGCTGCTGGGGGTGGCAGTGCGCTGCTGTGCGGGGGGGCGCTACACCCAGGCCGAGCCTGGGGGTGAGGAGCCGCCACCCATCAACCCTGAGGCGGCCAAGGTGGTGGCGGTGACGCTGGTGGAGGGTGTGTGCCCTGACGTGGCCAACAGCGAGCTGGCCTGGCCCCCTGAGGAGCATGCCCGGACCACAGTGGAGCGGGACATCCACGTGCGGCGCCACTTCGAGGCCAAccccctcctcttccccctGCTGCGCCTGGTGGCCTCCGGCCGCCCCGCCCTCTGCTACTGCTCTGTGGTCCTGCGTGGGCTGCTGGCCACCCTGCTGGCCCACTGGGAGGCCTCCCGGGAGCCCCACGCCCGGGACTCCCCCTGGCACCTCCATGCCTCCTGCCAGCTGGTGGCCTGCATGGGCGAGGGCCAGTTGCTGCCCCCGGCCCTGGCCAATGTCCACGAGATCTTCCCCTTCCTGGCGCCCTTCGAGGTCCGGCTGCTGCTTCTGGCCGTGTGGGACTACGTCCGTGgcaacagccccctcccccAGAAGTTCACCTTCAGCCCAGAGAAGGGGCTCTTTTACCGGGACTTTTCCCGCGACGGGGACCCCACCAAGTACCTGGCCCCCCTCTACAGTGTGCTGCACAAGAACATCGACCGGCTCGGCCACCAGTGCTGGCGCTTCCAGATCTGA

Function

GO: NA

KEGG:

id description
K13142 INTS5; integrator complex subunit 5

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015455 True 3147 mRNA 0.69 2 9816131 9819910

Neighbor

gene id symbol gene type direction distance location
AMCG00015461 NA coding upstream 5703 9772574 ~ 9810428 (+)
AMCG00015450 LOC100695529,LOC102800049,LOC102202559,LOC101072470 coding upstream 113359 9697300 ~ 9702772 (+)
AMCG00015443 LOC108440852,LOC107597921,LOC107683583,LOC107558412,LOC107710341,LOC557645,LOC107679244 coding upstream 171903 9643122 ~ 9644228 (+)
AMCG00015444 NA coding upstream 191549 9621732 ~ 9624582 (+)
AMCG00015435 NA coding upstream 230594 9572868 ~ 9585537 (+)
AMCG00015457 NA coding downstream 5005 9824915 ~ 9842408 (+)
AMCG00015458 NA coding downstream 43838 9863748 ~ 9868818 (+)
AMCG00015459 NA coding downstream 49232 9869142 ~ 9872454 (+)
AMCG00015467 NA coding downstream 91369 9911279 ~ 9915357 (+)
AMCG00015465 NA coding downstream 101076 9920986 ~ 9925429 (+)
G97999 NA non-coding upstream 110095 9705724 ~ 9706036 (+)
G97998 NA non-coding upstream 113022 9702836 ~ 9703109 (+)
G97989 NA non-coding upstream 158265 9655468 ~ 9657866 (+)
G97777 NA non-coding upstream 468887 9345762 ~ 9347244 (+)
G97770 NA non-coding upstream 485105 9327636 ~ 9331026 (+)
G98060 NA non-coding downstream 58549 9878459 ~ 9879136 (+)
G98195 NA non-coding downstream 376717 10196627 ~ 10197404 (+)
G98255 NA non-coding downstream 503348 10323258 ~ 10323970 (+)
G98244 LOC106578020 non-coding downstream 519198 10339108 ~ 10340845 (+)
G98277 NA non-coding downstream 545472 10365382 ~ 10365647 (+)
G98025 NA other upstream 55443 9757073 ~ 9760688 (+)
G98000 NA other upstream 105402 9706097 ~ 9710729 (+)
AMCG00015445 LOC102291110,LOC108440839,LOC107679294,LOC107731944,LOC102201806,LOC102799004,LOC108268318,LOC107558438,LOC570544 other upstream 184239 9624589 ~ 9631892 (+)
AMCG00015407 slc25a45 other upstream 779516 9029557 ~ 9036615 (+)
AMCG00015398 NA other upstream 838127 8971466 ~ 8978004 (+)
AMCG00015456 NA other downstream 31762 9851672 ~ 9862136 (+)
AMCG00015464 NA other downstream 109682 9929592 ~ 9930846 (+)
AMCG00015475 NA other downstream 181304 10001214 ~ 10012888 (+)
G98093 NA other downstream 265518 10085428 ~ 10086512 (+)
AMCG00015492 NA other downstream 393091 10213001 ~ 10222496 (+)

Expression


Co-expression Network