AMCG00015461


Basic Information

Item Value
gene id AMCG00015461
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 9772574 ~ 9810428 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015461
ATGGCCTGCGGAGCTCCACCGGAGATAGTTTGCCCACACTTCCAGAAGCAAACAGAAGAACAGATGTTCCAGCTCGTCAACTGCATGTCAATTTTGAACTGCCCCGGGATGCAGCTCCTCTTCGACTTGGACGTTGCTGGCATAGCAGCACTACTACCAAATAAGTCTATTTCCCCACTCGTCAACCAGATTTCAATGAATCTCTCTCACCCCAACATTGTGCGCTTCATTGCTGCAGCCAAGACTGAGAGATTTGTACTTTTGGTTTATGAATACATCCATGGTGCTGACCTGCATATTGTCCTCAAAGGAGACTACCTCTCAATACAGCTGACCAGAGAAGACAAGAGCCACATCGCTCTGGACCTGGCCATGGCAGTGGAGTACATTCACTCTAAACACATCATCCACCAGGACATAAAGCCAGCCAATGTGATGctcGAAGCAAAATCCAAGAAGGCCTACCTCATTGACTGGGGTATTGCTCATGTCAAAGACACAATATTTGTAATGGGAGGACGCATTGTACTCCGACTTCAAGGTGGCACACCATATTACATGGCCCCCGAGTGCTTACTGACCCAGTCTGAGGCCACGCTGCAGTCGGACGTGTGGTCCCTGGGAATTACCTTCATACAGTTATATACAAACGAGTTACCATGGGGTACAAACAACCTTCAAGTGATGCCCCTGCTCATGCAACTGAAGAGGCCTCCCCCTGGTTTAGGCCGTCTTAGCCAAACTGACAGAAAAGTAATTGAACCCATGCTGAGGTACACACCAGCGGCACGACTATCCGCGGAGGAGATTTACAGTGTGGAGCGGGTTGAGGCAGCAGCAATCTGTTTGGGATCGTCCATTGCCAGGCACttaggaggagaggagagacgcAACTCTGCACTGCAGCTGGGGGGAGGGGCGTTGCTCCGGGCCACGCTGTATGACACTTCCTGCCCCACCTTCCGCTCTGCCTCCCGCAGGATCTTGCTCACGGGCAGCGGGTCATACTTGTTGTCCAGCTTGTTGTTGATGTGGTACCGGTCACTGCCCACCACCGTCCGCAAGGGATCCTTCTTGATCACTGCCTTCTCGCACATCATGGACATTATACTGTACGCCCCCGCCCCTGCCAACTCGCCTGGAGGGAGGAATAGGAGgtggggagggagaaaaaagaagGAGAGGGACGAATGGAGGAGAAGCCAAGCAAGAAGGACAAATATACCAGCTATCTACTACATGTTCGTTCCATATGGGTCTGTACTCACCAAGAAGGGGGCCATGCTTGTGTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015461 True 1293 mRNA 0.52 11 9772574 9810428

Neighbor

gene id symbol gene type direction distance location
AMCG00015450 LOC100695529,LOC102800049,LOC102202559,LOC101072470 coding upstream 69802 9697300 ~ 9702772 (+)
AMCG00015443 LOC108440852,LOC107597921,LOC107683583,LOC107558412,LOC107710341,LOC557645,LOC107679244 coding upstream 128346 9643122 ~ 9644228 (+)
AMCG00015444 NA coding upstream 147992 9621732 ~ 9624582 (+)
AMCG00015435 NA coding upstream 187037 9572868 ~ 9585537 (+)
AMCG00015436 NA coding upstream 273595 9473172 ~ 9498979 (+)
AMCG00015455 NA coding downstream 5703 9816131 ~ 9819910 (+)
AMCG00015457 NA coding downstream 14487 9824915 ~ 9842408 (+)
AMCG00015458 NA coding downstream 53320 9863748 ~ 9868818 (+)
AMCG00015459 NA coding downstream 58714 9869142 ~ 9872454 (+)
AMCG00015467 NA coding downstream 100851 9911279 ~ 9915357 (+)
G97999 NA non-coding upstream 66538 9705724 ~ 9706036 (+)
G97998 NA non-coding upstream 69465 9702836 ~ 9703109 (+)
G97989 NA non-coding upstream 114708 9655468 ~ 9657866 (+)
G97777 NA non-coding upstream 425330 9345762 ~ 9347244 (+)
G97770 NA non-coding upstream 441548 9327636 ~ 9331026 (+)
G98060 NA non-coding downstream 68031 9878459 ~ 9879136 (+)
G98195 NA non-coding downstream 386199 10196627 ~ 10197404 (+)
G98255 NA non-coding downstream 512830 10323258 ~ 10323970 (+)
G98244 LOC106578020 non-coding downstream 528680 10339108 ~ 10340845 (+)
G98277 NA non-coding downstream 554954 10365382 ~ 10365647 (+)
G98025 NA other upstream 11886 9757073 ~ 9760688 (+)
G98000 NA other upstream 61845 9706097 ~ 9710729 (+)
AMCG00015445 LOC102291110,LOC108440839,LOC107679294,LOC107731944,LOC102201806,LOC102799004,LOC108268318,LOC107558438,LOC570544 other upstream 140682 9624589 ~ 9631892 (+)
AMCG00015407 slc25a45 other upstream 735959 9029557 ~ 9036615 (+)
AMCG00015398 NA other upstream 794570 8971466 ~ 8978004 (+)
G98053 NA other downstream 5290 9815718 ~ 9872005 (+)
AMCG00015456 NA other downstream 41244 9851672 ~ 9862136 (+)
AMCG00015464 NA other downstream 119164 9929592 ~ 9930846 (+)
AMCG00015475 NA other downstream 190786 10001214 ~ 10012888 (+)
G98093 NA other downstream 275000 10085428 ~ 10086512 (+)

Expression


Co-expression Network