AMCG00015462


Basic Information

Item Value
gene id AMCG00015462
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 9945834 ~ 9947066 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015462
ATGGCGGCGGCGGCGATGTTGCACAGACTGGCGAGCAGGAGCGGGTTCATCCCGGCTAAACACGTCCTCTCCGCGGCGTGTCGGCGGCACAGCACTGCGACAGCTGACCTGATTGACCACATGGATAAAAAGGAGACCTGGGATCGGTTCTACCAGCAGGCTGCCCCAgacaccccccctctctctccctctccctctctctccccctccctcccgcGGCCCTTGGAGTGGTTTTTCGGATTCCCTGACGTGTCCAAGCTTCTTCTGGCCACCCTGGGAGCGGAGGGGCCCCCCGCCCGTGTGCTGGACCTGGGCTGTGGCACCTCTGACCTGGGCCCCTCCCTGCTGGCCTCCTCCTCCCGGCCCGTGGATGTGGCCTGTGTGGACTTCTCCCCAGTGGCCGTGGCCCTGCTGCGAAACCGGCTGACGCAGTGCCCCCCCCAGCCACGCCACCCCGAGTCCTGCCTAGAGGTCCTGAAGCTGGACTGCACCACCGATCTCCTGGGGCACTTCGGTTCTGGCAGCCTGGACCTGGTTCTGGACAAGGCCACCACAGATGCCCTGCTGAGGTCGCCGGGGAGGGTGGCGGCGGGGCAGGCCCTCAGGCAGTGCCTGGGGGTGCTGCGGCCAGCGGGGGCCCTGCTGCAGTTCTCGGACGAGGACCCGGATGCCAGGCTGCCCTGGCTGGAGAGGGAGAGCCGCGCAGGAGGAGGCGACACGGCGGCCAGGGTGTCCCTGCAGGAGCTGGGCATGCTGAGAGGGGTGTGCTACTACTGCTACATCGTCAGCCCCGCCCCCTCCTCTCCAGAGCCCCCCAAAACTGAAGCCCAGGAGCCCTGA

Function

GO: NA

KEGG:

id description
K00614 CSKMT, METTL12; citrate synthase lysine N-methyltransferase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015462 True 840 mRNA 0.68 2 9945834 9947066

Neighbor

gene id symbol gene type direction distance location
AMCG00015466 LOC107741474,LOC107557052 coding upstream 2161 9935143 ~ 9943673 (+)
AMCG00015465 NA coding upstream 20405 9920986 ~ 9925429 (+)
AMCG00015467 NA coding upstream 30477 9911279 ~ 9915357 (+)
AMCG00015459 NA coding upstream 73380 9869142 ~ 9872454 (+)
AMCG00015458 NA coding upstream 77016 9863748 ~ 9868818 (+)
AMCG00015463 NA coding downstream 14460 9961526 ~ 9965454 (+)
AMCG00015472 NA coding downstream 35736 9982802 ~ 9986495 (+)
AMCG00015474 syvn1 coding downstream 41586 9988652 ~ 9996158 (+)
AMCG00015476 rpb7,POLR2G,polr2gl,polr2g coding downstream 66000 10013066 ~ 10015706 (+)
AMCG00015473 eef1g,LOC107661998 coding downstream 69390 10016456 ~ 10027569 (+)
G98060 NA non-coding upstream 66698 9878459 ~ 9879136 (+)
G97999 NA non-coding upstream 239798 9705724 ~ 9706036 (+)
G97998 NA non-coding upstream 242725 9702836 ~ 9703109 (+)
G97989 NA non-coding upstream 287968 9655468 ~ 9657866 (+)
G97777 NA non-coding upstream 598590 9345762 ~ 9347244 (+)
G98195 NA non-coding downstream 249561 10196627 ~ 10197404 (+)
G98255 NA non-coding downstream 376192 10323258 ~ 10323970 (+)
G98244 LOC106578020 non-coding downstream 392042 10339108 ~ 10340845 (+)
G98277 NA non-coding downstream 418316 10365382 ~ 10365647 (+)
G98282 NA non-coding downstream 431541 10378607 ~ 10379031 (+)
AMCG00015464 NA other upstream 14988 9929592 ~ 9930846 (+)
G98053 NA other upstream 73829 9815718 ~ 9872005 (+)
AMCG00015456 NA other upstream 83698 9851672 ~ 9862136 (+)
G98025 NA other upstream 185146 9757073 ~ 9760688 (+)
G98000 NA other upstream 235105 9706097 ~ 9710729 (+)
AMCG00015475 NA other downstream 54148 10001214 ~ 10012888 (+)
G98093 NA other downstream 138362 10085428 ~ 10086512 (+)
AMCG00015492 NA other downstream 265935 10213001 ~ 10222496 (+)
G98251 NA other downstream 369842 10316908 ~ 10317325 (+)
AMCG00015504 NA other downstream 464821 10411887 ~ 10418700 (+)

Expression


Co-expression Network