Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00015464 |
| gene name | NA |
| gene type | misc |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030132.1 |
| NCBI id | CM030132.1 |
| chromosome length | 32980562 |
| location | 9929592 ~ 9930846 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0042775 | mitochondrial ATP synthesis coupled electron transport | biological_process |
| GO:0006122 | mitochondrial electron transport, ubiquinol to cytochrome c | biological_process |
| GO:0022900 | electron transport chain | biological_process |
| GO:0008137 | NADH dehydrogenase (ubiquinone) activity | molecular_function |
| GO:0003954 | NADH dehydrogenase activity | molecular_function |
| GO:0016491 | oxidoreductase activity | molecular_function |
| GO:0050136 | NADH dehydrogenase (quinone) activity | molecular_function |
| GO:0016651 | oxidoreductase activity, acting on NAD(P)H | molecular_function |
| GO:0016655 | oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00015464 | True | 679 | mRNA | 0.54 | 2 | 9929615 | 9930846 |
| TU122294 | False | 629 | TUCP | 0.56 | 3 | 9929592 | 9930804 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00015465 | NA | coding | upstream | 4163 | 9920986 ~ 9925429 (+) |
| AMCG00015467 | NA | coding | upstream | 14235 | 9911279 ~ 9915357 (+) |
| AMCG00015459 | NA | coding | upstream | 57138 | 9869142 ~ 9872454 (+) |
| AMCG00015458 | NA | coding | upstream | 60774 | 9863748 ~ 9868818 (+) |
| AMCG00015457 | NA | coding | upstream | 87184 | 9824915 ~ 9842408 (+) |
| AMCG00015466 | LOC107741474,LOC107557052 | coding | downstream | 4297 | 9935143 ~ 9943673 (+) |
| AMCG00015462 | NA | coding | downstream | 14988 | 9945834 ~ 9947066 (+) |
| AMCG00015463 | NA | coding | downstream | 30680 | 9961526 ~ 9965454 (+) |
| AMCG00015472 | NA | coding | downstream | 51956 | 9982802 ~ 9986495 (+) |
| AMCG00015474 | syvn1 | coding | downstream | 57806 | 9988652 ~ 9996158 (+) |
| G98060 | NA | non-coding | upstream | 50456 | 9878459 ~ 9879136 (+) |
| G97999 | NA | non-coding | upstream | 223556 | 9705724 ~ 9706036 (+) |
| G97998 | NA | non-coding | upstream | 226483 | 9702836 ~ 9703109 (+) |
| G97989 | NA | non-coding | upstream | 271726 | 9655468 ~ 9657866 (+) |
| G97777 | NA | non-coding | upstream | 582348 | 9345762 ~ 9347244 (+) |
| G98195 | NA | non-coding | downstream | 265781 | 10196627 ~ 10197404 (+) |
| G98255 | NA | non-coding | downstream | 392412 | 10323258 ~ 10323970 (+) |
| G98244 | LOC106578020 | non-coding | downstream | 408262 | 10339108 ~ 10340845 (+) |
| G98277 | NA | non-coding | downstream | 434536 | 10365382 ~ 10365647 (+) |
| G98282 | NA | non-coding | downstream | 447761 | 10378607 ~ 10379031 (+) |
| G98053 | NA | other | upstream | 57587 | 9815718 ~ 9872005 (+) |
| AMCG00015456 | NA | other | upstream | 67456 | 9851672 ~ 9862136 (+) |
| G98025 | NA | other | upstream | 168904 | 9757073 ~ 9760688 (+) |
| G98000 | NA | other | upstream | 218863 | 9706097 ~ 9710729 (+) |
| AMCG00015445 | LOC102291110,LOC108440839,LOC107679294,LOC107731944,LOC102201806,LOC102799004,LOC108268318,LOC107558438,LOC570544 | other | upstream | 297700 | 9624589 ~ 9631892 (+) |
| AMCG00015475 | NA | other | downstream | 70368 | 10001214 ~ 10012888 (+) |
| G98093 | NA | other | downstream | 154582 | 10085428 ~ 10086512 (+) |
| AMCG00015492 | NA | other | downstream | 282155 | 10213001 ~ 10222496 (+) |
| G98251 | NA | other | downstream | 386062 | 10316908 ~ 10317325 (+) |
| AMCG00015504 | NA | other | downstream | 481041 | 10411887 ~ 10418700 (+) |
