AMCG00015472


Basic Information

Item Value
gene id AMCG00015472
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 9982802 ~ 9986495 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015472
TAAGGGCTGGGCTGGCAGTGCTCAGGGAGACTCAGTGGAGCTGCTGGAGGTGACTGTGTCCGTCAGCCTGTGTCTCCGTCAGCCAAAGCAAGCATGCAGCCCATTACCGTGGTCACCATCTGCCTCTGTCTGGCCATGTCCATCGAGGCCCAGAGACCCAAACCATGCGTGTCTCCACCTCTCCTGGAGGGGGGGGTTTCTGTGATGGAATCATCAACCTTCAAGGTGACCATTAGCTTGTTCTCCTATGACGGGCTGCTCAAGAGATTCCGCCTCCTGGCGAATGCGACTGGAGCTACACAGGACACCCTGCTGCTCTtcagagagCGTGTCCAGTACAGAATTTTCTACCAGAACCAGACGTGTGTGCGGTCGGCGCTGGACACCCCGTTCCGGCCCCTGGAGGTCCCCCCCGATGCCCAGTTCCTCAACCAGCTGGTCTTTGGGGGGTCGTCCCGGCCAGGCGAGGGGGTGCTCGTAAACCAGTGGATGGGAAAAGTGCCTGAGACCCAGGggACCTACTTCAGCCACTTCACCCAGTTTGGCTGCCTGCCTATCTCAGAGGTTTACTACACCCCCAAGAGCAACTGGCTCATCACgtatTTTGACATTGTCAGTGGGATCCGGGACCCCAATGTGTTCATCCCTCCCCCCTTCTGTGAGGAGAAGGGGAGCAGGCCGGAGGTGCTCTGAGTGTCCCTCCATGGGACTGAAGTGGAGGGGGGGTAGGCTGACCAATCAACATCCATCCAACACATTGCAATCCAGTCCAGTTCAGTTTGGATCACCCTATGTCGGCCTGTTTGAGATTCTCCCACGGTCAATCGACTGATTCCAGATCCTGAGGCCCCTTGTCAGGTGGGGGCCCGGGGAAGGTCAGGGGTCAGTGTGGTGTGATCATTGTGTCATTGGTGTCAGTTGAGGAGCGGAGGGCCAGGCTGGAGCACAGAGCAGATGTGCTGAACCTACCCACCCCCACGGTGTCCTGAGTGGGcctgttcattcattcattcattcattca

Function

GO: NA

KEGG:

id description
ko04976 Bile secretion

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015472 True 1022 mRNA 0.58 6 9982802 9986495

Neighbor

gene id symbol gene type direction distance location
AMCG00015463 NA coding upstream 17348 9961526 ~ 9965454 (+)
AMCG00015462 NA coding upstream 35736 9945834 ~ 9947066 (+)
AMCG00015466 LOC107741474,LOC107557052 coding upstream 39129 9935143 ~ 9943673 (+)
AMCG00015465 NA coding upstream 57373 9920986 ~ 9925429 (+)
AMCG00015467 NA coding upstream 67445 9911279 ~ 9915357 (+)
AMCG00015474 syvn1 coding downstream 2157 9988652 ~ 9996158 (+)
AMCG00015476 rpb7,POLR2G,polr2gl,polr2g coding downstream 26571 10013066 ~ 10015706 (+)
AMCG00015473 eef1g,LOC107661998 coding downstream 29961 10016456 ~ 10027569 (+)
AMCG00015484 NA coding downstream 95509 10082004 ~ 10083086 (+)
AMCG00015483 NA coding downstream 108594 10095089 ~ 10099174 (+)
G98060 NA non-coding upstream 103666 9878459 ~ 9879136 (+)
G97999 NA non-coding upstream 276766 9705724 ~ 9706036 (+)
G97998 NA non-coding upstream 279693 9702836 ~ 9703109 (+)
G97989 NA non-coding upstream 324936 9655468 ~ 9657866 (+)
G97777 NA non-coding upstream 635558 9345762 ~ 9347244 (+)
G98195 NA non-coding downstream 210132 10196627 ~ 10197404 (+)
G98255 NA non-coding downstream 336763 10323258 ~ 10323970 (+)
G98244 LOC106578020 non-coding downstream 352613 10339108 ~ 10340845 (+)
G98277 NA non-coding downstream 378887 10365382 ~ 10365647 (+)
G98282 NA non-coding downstream 392112 10378607 ~ 10379031 (+)
AMCG00015464 NA other upstream 51956 9929592 ~ 9930846 (+)
G98053 NA other upstream 110797 9815718 ~ 9872005 (+)
AMCG00015456 NA other upstream 120666 9851672 ~ 9862136 (+)
G98025 NA other upstream 222114 9757073 ~ 9760688 (+)
G98000 NA other upstream 272073 9706097 ~ 9710729 (+)
AMCG00015475 NA other downstream 14719 10001214 ~ 10012888 (+)
G98093 NA other downstream 98933 10085428 ~ 10086512 (+)
AMCG00015492 NA other downstream 226506 10213001 ~ 10222496 (+)
G98251 NA other downstream 330413 10316908 ~ 10317325 (+)
AMCG00015504 NA other downstream 425392 10411887 ~ 10418700 (+)

Expression


Co-expression Network