AMCG00015480


Basic Information

Item Value
gene id AMCG00015480
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 10158828 ~ 10161768 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015480
ATGGCGCCTGATGGCGTGGCAGAGCTGCGCGATTGGCTGTTCCTGCTCCTGCTGTGCCTCACGCTGCTGGCCGAAGCCCTTGAGTTCGCCGCCGCTGCTGCCGCTGCAGCTGCCGCCGCTCCTGCAGACGGGGAGTCTGGGGAGCCCTGCCCGGCTGCCTGCCGCTGCGACGACGGCTTCATCTACTGCAACGACCGGGGGCTCCGCGCCATTCCCCCCGGGATCCCCGCTGACGCCACCGTGCTGTACCTGCAGAACAACCGCATTCCCAACCAGGGTATACCGGCGGGGCTGGCGGCGCTGATCGGCGTGCGGGTCATATACCTGTACGAGAACGAACTGGATGACTTCCCGCTGCACCTGCCGCCCTCCCTGCGCGAGCTGCATCTGCAGGACAACAACATCCGCAGCTTGCCCCGCGCCGCACTGGCCCGTCTGCCGCTGCTGGAGAAGCTGCACCTGGATGACAACTCGGTGTCCACCGTGAGCATTGAGGACGACGCCTTTGCCGACAGCCCCCGGCTCCGGCTGCTCTTCCTGTCGCGCAACCACCTGAGCAGCATCCCATCAGGGCTGCCGGCTGCCCTGGAGGAGCTGCGGCTGGATGACAACCGCATCTCCACCATTCCCACGCACGCCTTCCGCGGCCTGCCCAGCCTGCGCCGCCTGGTCATGGACGGCAACCTGCTGGCCAACCAGCGCATCGCTGACGACACCTTCAGCCGGCTGGGCAACCTGACAGAGCTCTCACTGGTGCGCAACTCGCTACTGGCGCCGCCGCTCAACCTGCCTGCCCAGCACTTGCAGCGGCTCTACCTGCAGGAGAACGCCATCGGGCACGTGCCACGGGGGGCACTGGACGGCATGCGCCGGCTGCAGCGGCTCGACCTGTCCAGCAACAACCTCACCTCCCTGCCCCGTGGGCTGTTCCGAGACCTGGACAGCCTGTCGCAGCTGCTCCTGCGCGGCAACCCCTGGCACTGCGGCTGCAACCTGTTGTGGCTGCGCGACTGGCTGCGGGCACGCGGCTCCGTGAACGTGCGTGGTCTGATGTGCCAGTCGCCCGAGCGCGTACGTGGTATGGCCCTCAAGGACCTGGGTGCCGAGATGGACGACTGTACTGAggggggaggtggaggtggtggcgggggcgggggcgggggcgggggccGGGGGCCAGGGCCGGGAGCGGGGAGGGCATCGGGTGCACAGGGAGGGCAGGGAGCGGGCAGCgccaccacctccaccaccacatcccctcccccccagggCTCCCTCTTCACTCTCAGGTCCAAACGGCCCGGGATCCGGCTCCCCGACTCCGGCCTGGACTACCCACCCAATGCTGGGGGCAGCGAGGGGGGCCAGGCCCTGGTGCTGAAGGTGAAGCCGCTGACCCCTGACACTATCCACATCACCTGGAGGTCGGCGCTGCCCGTGGCCTCCTTCCGCCTCAGCTGGCTGCGGCTGGGCAATAGCCCGGCCGTGGGCTCCATCACCGAGACGCTGGTGCAGGGTGACCGGCGGGAGTACCTGCTGACCCCGCTGGAGCCCAAGTCCAGCTACATCATCTGCATTGTGCCGCTGGGCAGGGGGGGCAGTGGCGGGGACAGCTTGGCCAAGGGTTGGGGCGGTGGTGCTCCGTCCGCACCCAACGACAGCCCGGTCTGTGCCAAAGCCGAGACGGCAGACCCCAGCCTGCCAGGCAGCGACTCGGAGGGCGAGCAGCCCGGGGACCAGCTGGCCGCGCTGCCCCTGGCCGGCATCATCGGGGGGGCCACCGCGCTGGTCTCCTTGACCCTCATATTCGGTATCTTCTGCTGGTACGGCCACCGCTCTGGCTACCTGTTCGCCCGCGAGCAGAGCTACAGCCGGGGCAGCGGCGGGGGCAGCGGGGTCAGCGTGGTCGGCCCCCGCAAGCCCCAGGACGACTACGCCGAGTCAGGCACCAAGAAGGACAACTCTATCCTGGAGATCCGAGGACCCGGCTTCCAGATGACGGCACTGGGCAGCCGGCAGCCTCTGCAGCCCAAGCCACGCGAGGACTACttggcGTGTCTTTTAATTTTGGGGAACGGGGAGCAGGACAGGGGATGGGGGTGCAGGCAGTCCACATaa

Function

GO: NA

KEGG:

id description
K16362 FLRT; leucine-rich repeat transmembrane protein FLRT

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015480 True 2118 mRNA 0.69 2 10158828 10161768

Neighbor

gene id symbol gene type direction distance location
AMCG00015483 NA coding upstream 59654 10095089 ~ 10099174 (+)
AMCG00015484 NA coding upstream 75742 10082004 ~ 10083086 (+)
AMCG00015473 eef1g,LOC107661998 coding upstream 131259 10016456 ~ 10027569 (+)
AMCG00015476 rpb7,POLR2G,polr2gl,polr2g coding upstream 143122 10013066 ~ 10015706 (+)
AMCG00015474 syvn1 coding upstream 162670 9988652 ~ 9996158 (+)
AMCG00015481 LOC104949171 coding downstream 5859 10167627 ~ 10176121 (+)
AMCG00015482 NA coding downstream 18056 10179824 ~ 10188538 (+)
AMCG00015489 zbtb3,LOC107723820,LOC107602571 coding downstream 31939 10193707 ~ 10195872 (+)
AMCG00015490 NA coding downstream 66283 10228051 ~ 10228836 (+)
AMCG00015488 NA coding downstream 102254 10264022 ~ 10264459 (+)
G98060 NA non-coding upstream 279692 9878459 ~ 9879136 (+)
G97999 NA non-coding upstream 452792 9705724 ~ 9706036 (+)
G97998 NA non-coding upstream 455719 9702836 ~ 9703109 (+)
G97989 NA non-coding upstream 500962 9655468 ~ 9657866 (+)
G97777 NA non-coding upstream 811584 9345762 ~ 9347244 (+)
G98195 NA non-coding downstream 34859 10196627 ~ 10197404 (+)
G98255 NA non-coding downstream 161490 10323258 ~ 10323970 (+)
G98244 LOC106578020 non-coding downstream 177340 10339108 ~ 10340845 (+)
G98277 NA non-coding downstream 203614 10365382 ~ 10365647 (+)
G98282 NA non-coding downstream 216839 10378607 ~ 10379031 (+)
G98093 NA other upstream 72316 10085428 ~ 10086512 (+)
AMCG00015475 NA other upstream 145940 10001214 ~ 10012888 (+)
AMCG00015464 NA other upstream 227982 9929592 ~ 9930846 (+)
G98053 NA other upstream 286823 9815718 ~ 9872005 (+)
AMCG00015492 NA other downstream 51233 10213001 ~ 10222496 (+)
G98251 NA other downstream 155140 10316908 ~ 10317325 (+)
AMCG00015504 NA other downstream 250119 10411887 ~ 10418700 (+)
G98302 NA other downstream 286398 10448166 ~ 10450663 (+)
G98402 NA other downstream 574211 10735979 ~ 10741133 (+)

Expression


Co-expression Network