AMCG00015482


Basic Information

Item Value
gene id AMCG00015482
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 10179824 ~ 10188538 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015482
ATGGACACAGTGGAGAGCGTAGCAGGACAAGGCCGAGACGGACAGAGAGGcgggggagggagggacaggggAGGAAATGTGTTCGCTATGTCTCTGCGTCAGTGGCTCTCCAGCAGCTGGGCAGGACACTTCCTGTCCGTTATTCAGATTTTCACCATTGCCACAGCCACTCCGCCCTCCATGGCTGCGTGGGACCTGTCAGTGATAGTGGAGGACCTGGGTCCAGACGCCCCGCCCTTGAGTGTGAGCGTCACCAGCGAGCTGCATGTGGGGGGGGTCATCCTCAAGATCGTGGAGAAGACCCAGCTGCAGAGAGACTGGTCAGACTATGCCCTGTGGTGGGAGCAGAAGAAGCAGTGGCTGCTGAAGACCAACTGGACGCTGGACAAGTGTGGGGTCCAGGCCGACGCCCGTCTGTCCTTCACCTCGCAGCACAAGCCGGTGCGCCTGGGCCTGCCCAACGGCGCCACAATATCCGTCACCCTGAGGAGCTCTCTTTCCTGCGCCGCccagaggagaagaagaagaagcgaGAGAAAGATGGGAGTACGGAGGAGGTGTATGACCTGACAGGGGTGCACTTGGGAACaggctCCACGCCCACCTTCTACAATGGGATGCCGGCTCACTTCGCTGACTCGCCCCAGACGGAGGCGGTGTATAAGATGCTGTCAGTCAGCCAGCCAGGAGTTGCCCCCGAGGTCATGGCCAAGATGTTCCGGCCCACCAGCCTCATTGACAAAGCCCACATCAACGGCAGGTGGCTGGACTCATCACGCTCACTGATGCAGCAGGGCATCCAGGAGAATGACCGGCTGCTGCTGCGCTTCAAATACTTCACCTTCATAGACCTGGAGCCCAAGtatgaCATCGTTCGTCTCACACAGCTGTACGAACAGGCTCGCTGGGCCATCCTGCTGGAGGAGGTGGACTGCACTGAGGAGGAGATGATGTTGTTTGCTGCCCTGCAGTACCACATCAACAAGCAGTCCCAGAGCGAGACGGCCATCCAGTGTCCAGCCATGGACGACCTGGACTCTGCCCTGCAGTCCCTGGAGGTCAAGATGGACGGGGAGGAGAGCAGTGTGGACATGCTGGAGACCATGACGTCCATCCCAGAGCTCAAAGCCTACCTGAAGATCTTCAGGCCGAAGAGGCTGACTCTGAAGGGCTATAAGCAGTACTGGTTCGTGTTCAAGGACACCTGCATCTCCTACTACAAGAGCAAGGAGGAAGGCTTCGGGGAGCCCATTCAACAGATGAACCTCAAAGGCTGTGAGGTGGCCCCGGATGTCAACCTGGCTGGACAGAAGTTCTGTATCAGGCTGCTGATCCCGGCGCCGGAGGGCATGAGCGAAGTGTACCTGCGCTGTGACAATGAGGAGCAGTACGCTCAGTGGATGGGGGCGTGTCGACTGGCCTCCAAGGGCAAGACAATGGCGGACAGCTCGTACCCCAGTGAGGTGGCCAACATCCAGGCCTTCCTGGCCATGCAGCGCACCCAGCCCACCGGCCCCCAGCcctccgccgccgccgccgacGAAACCATCAACACCCACAGCCTGGTTTCCCCCCGCTACCAGAAGAAGTACAAGGCCAAGCAGTTAACTCCTCGTATCCTGGAGGCGCACCAGAACGTGGCCCAGATGTCCCTGCTGGAAGCCACAATGAAGTTCATCCAGATCTGGCAGGCTCTGCCCGACTTCGGCCTGTCCTACTTCGTAGTGAGgtttaAGGGCTGCCGTAAGGACGAGATCCTGGGCATTGCCAACAACAGGCTCATCCGCATTGACCTGGGGGTGGGAGACGTGGTGAAGACCTGGCGCTACAATAACATGAGGCAGTGGAACGTCAACTGGGACATCAAACagGTAGCCATTGAGTTTGAGGGCAACGTGAACGTGGCGTTCAGCTGCGTGACGGCCGACTGCAAGATCGTGCACGAGTACATCGGTGGCTACATCTTCATGTCCACGCGCACCAAGGAGCAGGGCGACTCGCTCAACCAGGAGCTGTTCCACAAGCTGACCGGCGGCCACGAGGCCCTCTGAGCCCctgccaccccccacccctaaCAGCCACCACACCCTCCCCCGCTGCTCCTCTAACATGCACCCAACACTCCCTACCGCCCCACCAGGCTCTTTATTTCCCTTCCAACCACCCCACTGAGCCCCTACTGTCCCTTCCCCACCAACTACACTCCTACCTACCCCTAACTCCCCCAGTGCCCAGCTTCCCCTCCATGCCCATATCTCTGCCCATTTAAGCCCCGCCTTCTGACCCCCTACGGAATCTTCAGCACTCCAGAGCTCGACCAATCGGGCAGCACGCTCACAGTTAGCCCCGCCCCACTCTCAATCACTGGAACGTACATACTGGGAGCTGTGGTACAGTACTGGGCAAGACAGCCCCAGGGGGCCACACTGGGAGCCTTTTTCCTTATCTCCCGtctttatacttttatttattttataatcgATTTCCTGCAAGGAGTAGTCCAGCTTGAGGGCAGGAGTCCTCTACTTCCCAGACTCTCTACAGTCCTGTAGCTGCTCTAGGCAGGGAGACACAGTCAGTGCTGGGAGGGACTCTGAGTCCACAGTATTGAACACACAGGCTGGTACATTGGTTTTGGTACAGTACCACACATATGGGaatctgcctgcctgtctcaGAGGTACTGTGCGGTGCAGACGTTTGGGACTGGAGCTGAGCGATGGGACCATATCAATTTACATAACAGAGTATTAATATCACATTAGAAAAGTGCTACCTTGTTCTATACAGTGTCATTGTAATTGACCTAACTAataaaggacaaaaacaaaa

Function

GO: NA

KEGG:

id description
K17084 FERMT3, KIND3; kindlin 3

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015482 True 2832 mRNA 0.57 16 10179824 10188538

Neighbor

gene id symbol gene type direction distance location
AMCG00015481 LOC104949171 coding upstream 3703 10167627 ~ 10176121 (+)
AMCG00015480 NA coding upstream 18056 10158828 ~ 10161768 (+)
AMCG00015483 NA coding upstream 80650 10095089 ~ 10099174 (+)
AMCG00015484 NA coding upstream 96738 10082004 ~ 10083086 (+)
AMCG00015473 eef1g,LOC107661998 coding upstream 152255 10016456 ~ 10027569 (+)
AMCG00015489 zbtb3,LOC107723820,LOC107602571 coding downstream 5169 10193707 ~ 10195872 (+)
AMCG00015490 NA coding downstream 39513 10228051 ~ 10228836 (+)
AMCG00015488 NA coding downstream 75484 10264022 ~ 10264459 (+)
AMCG00015491 NA coding downstream 88902 10277440 ~ 10289390 (+)
AMCG00015498 NA coding downstream 115201 10303739 ~ 10305772 (+)
G98060 NA non-coding upstream 300688 9878459 ~ 9879136 (+)
G97999 NA non-coding upstream 473788 9705724 ~ 9706036 (+)
G97998 NA non-coding upstream 476715 9702836 ~ 9703109 (+)
G97989 NA non-coding upstream 521958 9655468 ~ 9657866 (+)
G97777 NA non-coding upstream 832580 9345762 ~ 9347244 (+)
G98195 NA non-coding downstream 8089 10196627 ~ 10197404 (+)
G98255 NA non-coding downstream 134720 10323258 ~ 10323970 (+)
G98244 LOC106578020 non-coding downstream 150570 10339108 ~ 10340845 (+)
G98277 NA non-coding downstream 176844 10365382 ~ 10365647 (+)
G98282 NA non-coding downstream 190069 10378607 ~ 10379031 (+)
G98093 NA other upstream 93312 10085428 ~ 10086512 (+)
AMCG00015475 NA other upstream 166936 10001214 ~ 10012888 (+)
AMCG00015464 NA other upstream 248978 9929592 ~ 9930846 (+)
G98053 NA other upstream 307819 9815718 ~ 9872005 (+)
AMCG00015492 NA other downstream 24463 10213001 ~ 10222496 (+)
G98251 NA other downstream 128370 10316908 ~ 10317325 (+)
AMCG00015504 NA other downstream 223349 10411887 ~ 10418700 (+)
G98302 NA other downstream 259628 10448166 ~ 10450663 (+)
G98402 NA other downstream 547441 10735979 ~ 10741133 (+)

Expression


Co-expression Network