AMCG00015483


Basic Information

Item Value
gene id AMCG00015483
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 10095089 ~ 10099174 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015483
ATGAAATCTCCTAAGCTGGATGGCCCAGAGGTTGAGCTGCCTTCAGGAGAACTTGACATCTCCGGGCCAAAAATCAAAGGTGACTTTAAAGTACCAGGAATGGATTTGGATGTGAAGGGTCCCAGCAGTGACATCGACCTCAATGCCCCAGACCTGCACCTCGAGGGCCCAGATGCTAACATCAAGATGCCCAAAATCAAGAAGCCAAAGTTTGGATTGGGTGGCAAGGGCCCCAAAGCAGACGTGAAACTACCAGAAGGTGATGTCACACTTGAGACACCAGAGGTCAACCTCAAAGGGAAGAAAGGCAAGTTTAAGATGCCCAAAATGAAGGGGAAGGTGAAGAAGCCAGATGCCAGCATGGACGTGAAGTCTCCTGAGGTTGATGTGGACCTAGGCTCTCCTGACATCCACCTAAAGGGCCCCAAGGTCAAGAAACCTTTCTTTGGGAAGCTGCAGTTCCCGGATGTTGAGTTCGACATTGGGTCACCCAAGGTCAAGGGGGATGCTTCCCTCTCCGGCGGGCTGAAGACCCCCGAAATGGACCTGTCGGCTCCAGACCTGAAGGTAGACGTCACAGGCCCAGATGTCAACCTGCCTGATGTAGACCTGGAAGGCCCAGATGTCAAGATGAAGAAGCCCAAAATCAAGATGCCCAAATTCAACATCTCAGGGCCCAAACTAAAAACCCCAGACTTTGACGCCAAGGCCCCAAAACTGGATGCTGACTTGAGTGGGCCTGATGGCCCGGATGTGGACGTCAATCTGAAGGGCCCCAAAGTGGGAGGCGGCTTCGATGGCTCTGCTGACGCTAGCCTTTCTGGCCCAACGCTACAGGGCGAAATCAAGGGTCCAAAATTCTCCTCCCCTGATGTAGACATCAGCCTGCAGGGAGGCAAGGGTGGCCTGTCTGGGGAGCTCAGGGGCCCGGGCATGAGGGTGGAGGCCCCCAATGTCAACCTGAAGGGGCCCAAGATCTCGGGAGCTGGCCTGGATGTGAAAGGAGGAGCAGGGGTTGACATAGGCACCCCTGACTTGCAGGCCTCGACGGGTGGTCTGGATTTTGGAGATACCCAAGTCACCTTCCCCAAACTGAAGGTGCCCAAGTTCGGGATCGCCCTGCCCCAGCTGGAGGGCCCAGAGATGGGTGTGGATGTGGGCTCGGCGGGGGCAGCTGGCGGCGGAGGGGTAAACGTGACGGGTCCCTCGGTGGGTGGCCATCTGGGCTCCCCTGGTCTTGAGGTCTCGGGGCCGGAGCTGAAGGTGAGCCCGGGAGGGAAGGGAAAGATCAAGATGCCCAAGTTCTTTGGCAAGGCCAAGACGAAAGGTGGCTCAGCGGCCGACCTCAGCCTGCAGGGACCTGAGCTGGAGCTGTCTGGTGCCGGCGGCGGAGTGAAGGGCTCCAAGGGCCTGAGCCTGAGCTCGGGGGAGCTGCTGAGCGGTGACATCGCGGTGGGCGGTGGCGGCGGCGGCCTCAGTGTGTCACCCAAGAGCAAGTCAGCCTCCCTGGATCTGTTTAAGAAGTCGCGCCAccgctcctcctccatgagtgATGACGCCGGCGTGCCCTCGCCCTCATCGCCCACCGGGCATCTGGAGGCCGAGGGGGGTGGCGATTTCTCCCTGGAGGCGGGGGGCGCTAAGGTGAAGGGCAAGAAGGGCAAGATGAAGTTCGGCACGTTCGGCGGCTTCGGGGCCAAGTCCAAGGGCTCATACGAGGTGACGCtgggcgaggaggaggagggcgcACGAGTTGAGGGCACGGGGGGCGTCTCCCTGCCTGCCAAGAAATCGCGCATCTCGTCCTCCTCCAGCAGCGACAGTGGCGCCCGGGGGGGGTTCCGCTTCCCCCGGGTGGAGATCGCCgtctccaaaaaataa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015483 True 1881 mRNA 0.60 2 10095089 10099174

Neighbor

gene id symbol gene type direction distance location
AMCG00015484 NA coding upstream 12003 10082004 ~ 10083086 (+)
AMCG00015473 eef1g,LOC107661998 coding upstream 67520 10016456 ~ 10027569 (+)
AMCG00015476 rpb7,POLR2G,polr2gl,polr2g coding upstream 79383 10013066 ~ 10015706 (+)
AMCG00015474 syvn1 coding upstream 98931 9988652 ~ 9996158 (+)
AMCG00015472 NA coding upstream 108594 9982802 ~ 9986495 (+)
AMCG00015480 NA coding downstream 59654 10158828 ~ 10161768 (+)
AMCG00015481 LOC104949171 coding downstream 68453 10167627 ~ 10176121 (+)
AMCG00015482 NA coding downstream 80650 10179824 ~ 10188538 (+)
AMCG00015489 zbtb3,LOC107723820,LOC107602571 coding downstream 94533 10193707 ~ 10195872 (+)
AMCG00015490 NA coding downstream 128877 10228051 ~ 10228836 (+)
G98060 NA non-coding upstream 215953 9878459 ~ 9879136 (+)
G97999 NA non-coding upstream 389053 9705724 ~ 9706036 (+)
G97998 NA non-coding upstream 391980 9702836 ~ 9703109 (+)
G97989 NA non-coding upstream 437223 9655468 ~ 9657866 (+)
G97777 NA non-coding upstream 747845 9345762 ~ 9347244 (+)
G98195 NA non-coding downstream 97453 10196627 ~ 10197404 (+)
G98255 NA non-coding downstream 224084 10323258 ~ 10323970 (+)
G98244 LOC106578020 non-coding downstream 239934 10339108 ~ 10340845 (+)
G98277 NA non-coding downstream 266208 10365382 ~ 10365647 (+)
G98282 NA non-coding downstream 279433 10378607 ~ 10379031 (+)
G98093 NA other upstream 8577 10085428 ~ 10086512 (+)
AMCG00015475 NA other upstream 82201 10001214 ~ 10012888 (+)
AMCG00015464 NA other upstream 164243 9929592 ~ 9930846 (+)
G98053 NA other upstream 223084 9815718 ~ 9872005 (+)
AMCG00015456 NA other upstream 232953 9851672 ~ 9862136 (+)
AMCG00015492 NA other downstream 113827 10213001 ~ 10222496 (+)
G98251 NA other downstream 217734 10316908 ~ 10317325 (+)
AMCG00015504 NA other downstream 312713 10411887 ~ 10418700 (+)
G98302 NA other downstream 348992 10448166 ~ 10450663 (+)
G98402 NA other downstream 636805 10735979 ~ 10741133 (+)

Expression


Co-expression Network