AMCG00015490


Basic Information

Item Value
gene id AMCG00015490
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 10228051 ~ 10228836 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015490
ATGGCAGCCAATCACACTTCCCGGAGGCCTgtcctcctcctgctcttcctcctgACCCTGACAGGCGGCGGCTGGGCCAATCCGCTGGCCGCCACGGGCGGAAATGTGACCAAGACCCCACCCGGCTCGACGAGGGGCCGCATCCTGTACGTGACGGGGCTGCGCTTCACCGACATCGACTATGAGGACCCGGACCAGGAGTCCGGGGGGACCCCACCCGCCCCGACCCCCGACTTCAACCCACAGCCCTGTGACTACAACCGCTGCCATGACAACCAAACACCCTGCGCCCAGCTGAGGGAGGCAAGCGGCTGTCTGTGCCCAGGCCTCAGCGGGCCTCAGGAGCTTCCCGAGGCCCCCTTCCTGCAGGAAGTGGCACTGCAGGCTTCGGGGGTCAGAGTTCACTGGTGCGCCCCCACCTCCACCGTGGAGCGCTACAAGGTGATGGTGGAAGGTCGTGGACCTGTAGAGTTTGGGGAGAGCACCCGGACTGTGGTGCTGGAGGGGTTGGAGGTGGGTGGGAGCTACAGGGTGTGTGTGCAGGCTGTCAACCCCGCCGGGTCCAGCCCCCTGACCGAAAGCTCCTGCTCCAAGTTCCAGGTCAAGCCGGACACCCAGGTGGGGCTCCTGGTGGGGCTGATAGCGGGCGCTGTGCTGGTGCTGTTGAGCATAGCAGTGGGGGGGTACCTGCTATGGAGGCGGCGGAGCAGGAGGAAGGAGGTGCGGGGGGCGGCAGCTGGGGAGGGGCTGGGGAACCCCACCTACACTACTGATGGGCCAATGTGA

Function

GO: NA

KEGG:

id description
K24493 LRRN4; leucine-rich repeat neuronal protein 4

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015490 True 786 mRNA 0.67 1 10228051 10228836

Neighbor

gene id symbol gene type direction distance location
AMCG00015489 zbtb3,LOC107723820,LOC107602571 coding upstream 32179 10193707 ~ 10195872 (+)
AMCG00015482 NA coding upstream 39513 10179824 ~ 10188538 (+)
AMCG00015481 LOC104949171 coding upstream 51930 10167627 ~ 10176121 (+)
AMCG00015480 NA coding upstream 66283 10158828 ~ 10161768 (+)
AMCG00015483 NA coding upstream 128877 10095089 ~ 10099174 (+)
AMCG00015488 NA coding downstream 35186 10264022 ~ 10264459 (+)
AMCG00015491 NA coding downstream 48604 10277440 ~ 10289390 (+)
AMCG00015498 NA coding downstream 74903 10303739 ~ 10305772 (+)
AMCG00015503 NA coding downstream 161457 10390293 ~ 10394630 (+)
AMCG00015502 NA coding downstream 207015 10435851 ~ 10443627 (+)
G98195 NA non-coding upstream 30647 10196627 ~ 10197404 (+)
G98060 NA non-coding upstream 348915 9878459 ~ 9879136 (+)
G97999 NA non-coding upstream 522015 9705724 ~ 9706036 (+)
G97998 NA non-coding upstream 524942 9702836 ~ 9703109 (+)
G97989 NA non-coding upstream 570185 9655468 ~ 9657866 (+)
G98255 NA non-coding downstream 94422 10323258 ~ 10323970 (+)
G98244 LOC106578020 non-coding downstream 110272 10339108 ~ 10340845 (+)
G98277 NA non-coding downstream 136546 10365382 ~ 10365647 (+)
G98282 NA non-coding downstream 149771 10378607 ~ 10379031 (+)
G98299 NA non-coding downstream 199749 10428585 ~ 10432044 (+)
AMCG00015492 NA other upstream 5555 10213001 ~ 10222496 (+)
G98093 NA other upstream 141539 10085428 ~ 10086512 (+)
AMCG00015475 NA other upstream 215163 10001214 ~ 10012888 (+)
AMCG00015464 NA other upstream 297205 9929592 ~ 9930846 (+)
G98053 NA other upstream 356046 9815718 ~ 9872005 (+)
G98251 NA other downstream 88072 10316908 ~ 10317325 (+)
AMCG00015504 NA other downstream 183051 10411887 ~ 10418700 (+)
G98302 NA other downstream 219330 10448166 ~ 10450663 (+)
G98402 NA other downstream 507143 10735979 ~ 10741133 (+)
AMCG00015528 NA other downstream 643834 10872670 ~ 11227821 (+)

Expression


Co-expression Network