AMCG00015491


Basic Information

Item Value
gene id AMCG00015491
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 10277440 ~ 10289390 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015491
CCGCAGTGTGGTGCCTGCTGTGCCTGGGGTATCCTGCGGGGGCACTGTGGCGATGGGGGACCGGGAGGAGAGGCGCTTTGCTGAGGTGCCACGTGACTCTGTGAGGCTCATGGCGGAGAGCGCTGGCAGCAGCTCTCAGTTCATGCGACATGCCAAGCGCAGGAAACTGACTGTGGAGGACTTCAACAGGGCCCTGCGCTGGAGCAACGTGGAGGCGGTGTGTGGGCACGGGGCCCCAGACGCTCTGCCCTTCCGGCCCATCAAGGAGGGGGAGCTGTACTTCGTGGAGGACCGTGAGATCAACCTGGTGGAGCTGGCCCTGGCCACCAACATCCCTAAGGGCTGTGCGGAGACCATGGTGCGAGTGCCCAGCGCGGTGCAGACGCTCTCGGATGACCTCCACAAGTACTACCAGCAGGTGACCCGCGCCATCCTGGGCGATGACCAGCACCTCATGAAGGTGGCCTTGCTGGATCTCCAGTCAAACTCCAAAATCGCTGCCCTCCTGCCCTACTTTGTGTATGTCATCAGTGGGCCCCTGGCCGCCTCCATCAACCCCCTGAACGACCATTGGACACTGCGGGACTACGCCGCCCTGCTACTCAGCCACATCTTCTGGACTCATGGTGACTTGGTGAGCGGCCTGTACCACCAGATCCTGCTGTCCCTGCAGAAGGTGCTGTCCGACCCGGTGCGCCCGCTCTGCTCGCACTACGGCGCCGTCGTGGGGCTGCACGCCCTGGGCTGGAAGGCAGTGGAGCGCGTGCTGTACCCCCACCTCCCCGCCTACTGGTCCAACCTGCAGGCTGTGCTGGACGACTACTCGGTGTCCAATGCCCAGGTCAAGGCCGACGGACACAAGGTCTACGGAGCCATCCTGTCTCTGTCTGCGCCGGCAGCGGTGGGCGGCGGTCATGAGGGGGGGGGCAcacaggggggcagggagagcTCTCCCGGTCTCAGCCCCCCCCCAGAGCCGCTGTCCGAGGCCGTCCTCGGCATCGCCAGCCACCTGCAGGCAGGGGGCGTGGGGGGTGCCGGTTGCCCCTGGGAGGGGGGGGTGCCCGTGCCGCTGCCCACTATGTATGGGGAGCTGTACTCCTTCTTCGGGGACAGCCTGGCCGTGCGCTTCAGCACTGGCCCCCCGCCGGGCAgcgccccccccaccaccccgcTCCACCCTGCCGACGCCAAGAAAGACCCCCCTGGTGGCGCAACCAACATGGACACCAACGCCCGCAAGATGCCCCAGCTCACCGCCAACCTCAACATCAGCCCCCGCGACGAGGGCAGCCCCCGGCCCGACCCCACCCCACCCAGCCTGGCCTCCCCTGCCACCGGCAGgtcgATCTCtcgctcttcctcctcctctgtcccTCGCTCCCGCTCCTCCTCTCGGGCAGGTCAGCGCTCGGGCGGTGGCGGCATCGGGGCCAGCAGTGGCGGCGCCCCACCCCGTGACATCTTCCCCAAGGCCCGCTTCCCACCCCCGCAGGCCAGCCCCCCCGGCTTCTCCTTCCTGATCGGGGGCCGGCAGATGGGCCGCCGTTGCCAGGGGAGACGGTTCCAGACCAGCTTCTCCCCCCCGGCCCCCCTCACCACCCTGCCCCCCCGCGGCTACGCACACAAGCTACCCGTCATCGGCCGGGTGGGGAAGCCGGTCCGGCGCTGGACCTGCTCCCACTATTCCCTGCACCTCCCGCTCTAGGGGCGCGGGGCTCGGACTGCTGACAGCATGGCATTGTGGGTAAAAGCTCTTGGAATTTAGTagattgacacacacactgagactcacacacacacacacacacacacactggtagACTGACACAAATACTCCCCTTAAACAACATTAAAGTTTGCCCCGCCCCCAACTGCCTGCCAACTTGACCCCCAACTTGGCACAGCACTGGAGTCTGGCACATTGGGGCCTGGCACCACGACTCTGTCCTTACCAGAGCCTGGACTGAGCTCCTGGAGTTGGGCCTGTGGAGGAACCTTGTAATGGGAACTATGTACTGATACAGGAAGGGGAACTGGcactttttttaagaaactgtaaaatatttgtccATTAGAGTCAAGAGCAAGGGAATCCTACGCACCTAGAGAGATGAATTCGGATCAGCGGAACTGGATTTGTGCGATTGGTTGTTTGTGAGTTTGTTTGGACTCCTTGTGTGCCGGAGCATCCCGGGTTGGTTACCACTGATGGGTCGTGATGAGCTGACGAGGGTGCACGTTTTCAGTACAGCTTTTCACCTGGGCATCTTGTGGGCATGTAGCTGAAGGACTGGCAGGGGGAAAAGAATGCCCTGCTGGCGTGTGTGGTGTAGCGCCTGGTGAACTTCATCAGAACagatagtttattttttattttttattattatatgacaTTGGACATGCTGGAGTTTGAATTGAATGGCAAAAGGAATTACACACGGAATTGGAATGGGAAACACTGTCTGAACGGCGGGGGGGGAATATTGTGGAACAGCATGCACAGATTTGTCCGTCGCTTGGGATCAGGTCTAAAGACAACCATAGGGAATAAATGGGCAATCGACGTCTCCCACTCTGATCTGCAGCGGAGATAGCGCTCTCCATGGCCCAGCAGACTCGAGCAAGAGCGAGACCGAGGGGTGCTTGGGTTGCCCAGGGTCTGAAGCATTGATGTCAGGTGGTGAATAAAGCTTTtatcattca

Function

GO: NA

KEGG:

id description
K03131 TAF6; transcription initiation factor TFIID subunit 6

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015491 True 2706 mRNA 0.61 10 10277440 10289390

Neighbor

gene id symbol gene type direction distance location
AMCG00015488 NA coding upstream 12981 10264022 ~ 10264459 (+)
AMCG00015490 NA coding upstream 48604 10228051 ~ 10228836 (+)
AMCG00015489 zbtb3,LOC107723820,LOC107602571 coding upstream 81568 10193707 ~ 10195872 (+)
AMCG00015482 NA coding upstream 88902 10179824 ~ 10188538 (+)
AMCG00015481 LOC104949171 coding upstream 101319 10167627 ~ 10176121 (+)
AMCG00015498 NA coding downstream 14349 10303739 ~ 10305772 (+)
AMCG00015503 NA coding downstream 100903 10390293 ~ 10394630 (+)
AMCG00015502 NA coding downstream 146461 10435851 ~ 10443627 (+)
AMCG00015505 LOC103385808,LOC107690779,LOC103366237,LOC103033313,LOC102208922 coding downstream 195552 10484942 ~ 10489317 (+)
AMCG00015512 NA coding downstream 223245 10512635 ~ 10517039 (+)
G98195 NA non-coding upstream 80036 10196627 ~ 10197404 (+)
G98060 NA non-coding upstream 398304 9878459 ~ 9879136 (+)
G97999 NA non-coding upstream 571404 9705724 ~ 9706036 (+)
G97998 NA non-coding upstream 574331 9702836 ~ 9703109 (+)
G97989 NA non-coding upstream 619574 9655468 ~ 9657866 (+)
G98255 NA non-coding downstream 33868 10323258 ~ 10323970 (+)
G98244 LOC106578020 non-coding downstream 49718 10339108 ~ 10340845 (+)
G98277 NA non-coding downstream 75992 10365382 ~ 10365647 (+)
G98282 NA non-coding downstream 89217 10378607 ~ 10379031 (+)
G98299 NA non-coding downstream 139195 10428585 ~ 10432044 (+)
AMCG00015492 NA other upstream 54944 10213001 ~ 10222496 (+)
G98093 NA other upstream 190928 10085428 ~ 10086512 (+)
AMCG00015475 NA other upstream 264552 10001214 ~ 10012888 (+)
AMCG00015464 NA other upstream 346594 9929592 ~ 9930846 (+)
AMCG00015456 NA other upstream 415304 9851672 ~ 9862136 (+)
G98251 NA other downstream 27518 10316908 ~ 10317325 (+)
AMCG00015504 NA other downstream 122497 10411887 ~ 10418700 (+)
G98302 NA other downstream 158776 10448166 ~ 10450663 (+)
G98402 NA other downstream 446589 10735979 ~ 10741133 (+)
AMCG00015528 NA other downstream 583280 10872670 ~ 11227821 (+)

Expression


Co-expression Network