AMCG00015502


Basic Information

Item Value
gene id AMCG00015502
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 10435851 ~ 10443627 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015502
ATGCCCGATTCCGATCGCCTTCCTTCCAGGCTGCCCAAGGCTGCCGACGGGGAAGTGAGGCTGGGCTGGTGGTTGAGGCCACAAGGGAGCGAGTGGAGGAGAAAGAAGATGGAGGAAGAGGGGCCCAGAGCGCAGATGGAGGAAGAGGGGCCCAGAGCGCAGACGGAAGGGGAATGGCCCAGAGCGCAGACGGAAGGGGAATGGCCCAGAGCGCAGACGGAAGGGGAATGGCCCAGAGGGCAGACGGAAGGGGAATGGCCCAGAGCGCAGGCGGAAGGGGAATGGCCCAGAGCGCAGGCGGAAAGGGTTGGGCCCAGAGCCCAGATGGAAAGGGATGGGCCAAGGCCAGGGCCAGCGCTGGTGCCGGCAGAGAGCTACGCGGCGGAGGCCATGGCAGCCGATATGGACCCCTGGATCAAATTTAACACACGCAATACCCCGCACGCTGAATTCGAGGCCTGGCTGGAGAACAACCGGCCCTCGCAGGTGAACCGCTATGGTGCCTCGGGTGGCTCCAATGTGGGCTGGATCGCCGTGTACGGCCCGAGCTACTGCTCCAACACAGGCGACGTGGACGGGCTGCAGGAGGACTGGGAGCGCCTGCTGGCCAGCGGCCGGCCAGTGTCCTTCGCGACAGTGCGGGAGCTGGCACTGAACCACGGCGTTCTCTCTGGCAAGTGGCTGATACACCTGGACTCGGGCTTCAAGGTGGACCATGCCTGGGAGGGCATCGCACGCACCGTGGTGGAGGGCAGCATCCCGGTCGCCAAGGTGAGCCCCCGCTGCCCCGCCCCCGAGGACAAGCACGTCATCTGCGTCTACACCCATGCCTTCACTGATCAGGATGAGGTTGTGCGGCTGGAAGCGGCCATCCGAGCCACCGGCGTCAAGTGCCCGCTGTCCTTCAAGCCCGACGTCTACACCTACCTGGGCATCTACCGCAACAACCGCTGGAAGCTCTGCCCCACCATCTATGAGAGCAAGTTCGACCTGGAGAGCGTGCCCCGGCGCTCCCACATCACCAACAAAGTCACCGGTGCCGAGGTCACATAAGCTGGGGGGTGGAGGCTTGTGGTGGGGAGTGATATGGGAGAGAGGGTGAGGAGAGGACACTTGTGTTGTGTCTGGAGGGTTCCCCTGTTTGGgctttgggttttgttttgttatttctgcCAACAGCTTCCAGCTCCCCCGCTGCAGTTTCCCCGGGTAGCATGCTCCTGTTCAAACAGTGTCAGCGGAAGCACCTTTGAGCATTTCAAAAGATTCACACTTCCTCGCCTGGGCAGCGCACCTTCCAACACCCTGTCAGGGACCGCCTTTTACAGCCCCCCAGCTACTGCAAAGGACCATCCCCTGAATTGGAAGTGCCCCAGCAGCAAGTGGGCCCAGCGACTCAGCGACTCTAAGGGGAGTTATTGAATCCTGGGACACCCACCTCATTTAGGTTCTACCCCTCATTTAAAAACCAGATCCAAACCTTCAGTTACTTGGATCAATTTAGTTGTGTGATCAGTTAGACATCTATACAGGTAcaaattttttgttttgattcaagGTGCCACTTACTGTAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015502 True 1575 mRNA 0.60 2 10435851 10443627

Neighbor

gene id symbol gene type direction distance location
AMCG00015503 NA coding upstream 41221 10390293 ~ 10394630 (+)
AMCG00015498 NA coding upstream 130079 10303739 ~ 10305772 (+)
AMCG00015491 NA coding upstream 146461 10277440 ~ 10289390 (+)
AMCG00015488 NA coding upstream 171392 10264022 ~ 10264459 (+)
AMCG00015490 NA coding upstream 207015 10228051 ~ 10228836 (+)
AMCG00015505 LOC103385808,LOC107690779,LOC103366237,LOC103033313,LOC102208922 coding downstream 41315 10484942 ~ 10489317 (+)
AMCG00015512 NA coding downstream 69008 10512635 ~ 10517039 (+)
AMCG00015509 NA coding downstream 96293 10539920 ~ 10541947 (+)
AMCG00015511 NA coding downstream 99635 10543262 ~ 10546764 (+)
AMCG00015510 sssca1 coding downstream 104149 10547776 ~ 10553456 (+)
G98299 NA non-coding upstream 3807 10428585 ~ 10432044 (+)
G98282 NA non-coding upstream 56820 10378607 ~ 10379031 (+)
G98277 NA non-coding upstream 70204 10365382 ~ 10365647 (+)
G98244 LOC106578020 non-coding upstream 95006 10339108 ~ 10340845 (+)
G98255 NA non-coding upstream 111881 10323258 ~ 10323970 (+)
G98310 NA non-coding downstream 46281 10489908 ~ 10493701 (+)
G98311 NA non-coding downstream 50897 10494524 ~ 10494951 (+)
G98312 NA non-coding downstream 53209 10496836 ~ 10497062 (+)
G98338 NA non-coding downstream 86333 10529960 ~ 10571890 (+)
G98398 NA non-coding downstream 264794 10708421 ~ 10708753 (+)
AMCG00015504 NA other upstream 17151 10411887 ~ 10418700 (+)
G98251 NA other upstream 118526 10316908 ~ 10317325 (+)
AMCG00015492 NA other upstream 213355 10213001 ~ 10222496 (+)
G98093 NA other upstream 349339 10085428 ~ 10086512 (+)
AMCG00015475 NA other upstream 422963 10001214 ~ 10012888 (+)
G98302 NA other downstream 4539 10448166 ~ 10450663 (+)
G98402 NA other downstream 292352 10735979 ~ 10741133 (+)
AMCG00015528 NA other downstream 429043 10872670 ~ 11227821 (+)
AMCG00015539 NA other downstream 615863 11059490 ~ 11066855 (+)
AMCG00015544 LOC105903120,LOC107562780,LOC108434861,LOC107691965,LOC106577530,LOC107742298 other downstream 914525 11358152 ~ 11416599 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_033299 C7H11orf68 coding NC_007118.7 CM002891.2 756942 ~ 763406 (+)