AMCG00015508


Basic Information

Item Value
gene id AMCG00015508
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 10450229 ~ 10460735 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015508
GACGTCATCCGGGTATTTCCGAGAGGGGAGTACGACTCGGGCGCCTGCGGGAGCGACGGACGGGGCGGAGGGGCGCAGACACGGGCGAGGACCGGGGCGACACGACAACAAACCCGTCCACAGCGGAAGGCGCACACAGTCGGGTGGCTCCGGCGGCTTAGCTCTGCGACAAAACACGGATAGACCCCCGGGAGCCGAGATCGCGGTGCGGGCGACGCGCATTTCGGATGGCGAACATGGATGGAATGCCGTTTTCCTGGAACCAGTCCAACATGAACACAGGGGCTCCCTACACAGAGATCATCGAGCAGCCCAAGCAGAGAGGGATGCGCTTCCGCTATAAGTGCGAGGGCCGGTCGGCGGGCAGCATCCCCGGCGAGAAGAGCAATGACAGCACCAAGACACACCCAGCCATCAAGATCCACAACTACAGCGGCCCGGTCAGGGTGCGCATCTCCCTGGTCACCAGGAATGTACCGTACAAACCGCATCCCCACGAGCTGGTGGGCAAGGACTGCAAGCACGGCTACTACGAAGCAGACCTGCAGGACCGGCGTAACCTGGGGATCCAGTGTGTGAAGAAGAAGGACGTGGCAGAAGCAGTGGCATATCGGCTACAGACGCAGAACAACCCCTTCAACATCCCAGAGGCAGACGTGTGGGGGGAGGAGTATGACCTGAACGCCGTGTGCCTGTGCTTCCAGACCTCCATCCACTTGCCCACAGGGGAGCTTCTCCCACTGGAGCCTGTGGTGTCCCAGCCCATCTACGACAACCAAGACATCGAGGTGCGGTTCTTTCGGGACTCCTGGGAGGGGAAGGGCTCCTTCTCCCAGGCTGACGTGCATCGCCAGGTGGCCATCGTGTTCCGGACGCCCCCCTACAGCGACGCCAACCTCACCGAGCCCGTCAAGGTTAAGATGCAGCTGCGGCGACCCTCCGACCGGGAGGTCAGCGAGCCTGTGGACTTCCAGTACCTCCCGGTGGACCAAGATGAGTACCGGCTGATGGAGAAGCGGAAACGCACGGAGGGAATGTTCCAGAACCTCAAGCTGTCGAATATTGTTCAAGGGGCGACCCCAGTGGATAGGCGGCTCTTCCACATCCCCAAGAGGACACCCATGGTATCGGCGCCCACGTTTTTCAGCTCCCCACCGCCCGCCTTTCAAGTGGTGCCAAGCCAGCCCAAAGCAGACGAAACCACGCCCGTCTGGTCCTTCATCAGGGACCTGACGATGGACGAGCCCGGGAAAAGCGCCACCCCGGCTGCTGCCACCACCTTCGGTGCCCCTACCCAGGACTACCCCACAGTCAACCTGTCTGACTTGTACGGCTACACCTTCCCGGGGATCTCCGGTGCCAAggatggtgggggtgggggtgggggtggaggggtggtTAGTGATGCCGGGGCAGGAGGGGGAGGCGGCGGCAGCGGCGGTGGCGGCGGCTGCATGGGGGGGGTCATGATGGACACGTCGGCCCCACTGAAGCCCCTCTTCAGCGGTCATGAAGACGACGACATCCCAGAATTCCCCAGCTTCTCGGAGGCCCAGCCCTCGGTCACCCTGGACTGCATCGACACAGAGGAGTTCCAGGAGCTGCTGGGGCAGAACTGCGTTGCGGTGCCGGAGGGCACGGGCGGCTCCCAAGGCCAGGACCCCGCGGCCGGGCAGATCTCCAACCCCAACACCTGGATGAACTACCCCAACAGCATCATGAGTCTCCTGCAGAGCGAGGGCCTGCTGGACAGCGGCACCCATCATCAGCAGGCCATGGCCCCCACGCTGGACGACACCGACGAGCTCAACTCCCTGGACGACGACCGCCTCATGTCCATCTTCAGCGGCAGCTCCCACAACTTCCTGTCCCACAACCCCGGCTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015508 True 1886 mRNA 0.63 10 10450229 10460735

Neighbor

gene id symbol gene type direction distance location
AMCG00015506 drap1 coding downstream 13219 10431798 ~ 10437010 (-)
AMCG00015507 kat5,LOC106603125,LOC106563454 coding downstream 45373 10394444 ~ 10404856 (-)
AMCG00015500 zdhhc24 coding downstream 94264 10353209 ~ 10355965 (-)
AMCG00015499 NA coding downstream 116092 10298043 ~ 10334137 (-)
AMCG00015494 NA coding downstream 179917 10267939 ~ 10270312 (-)
AMCG00015514 NA coding upstream 32405 10493140 ~ 10505219 (-)
AMCG00015515 bbs1,LOC107579588 coding upstream 69318 10530053 ~ 10538036 (-)
AMCG00015518 NA coding upstream 174180 10634915 ~ 10636279 (-)
AMCG00015526 NA coding upstream 316095 10776830 ~ 10795268 (-)
AMCG00015523 NA coding upstream 337685 10798420 ~ 10803527 (-)
G98216 NA non-coding downstream 227704 10173101 ~ 10222525 (-)
G98211 NA non-coding downstream 284832 10107233 ~ 10165397 (-)
G98163 NA non-coding downstream 374336 10026114 ~ 10075893 (-)
G98126 NA non-coding downstream 432360 9929562 ~ 10017869 (-)
G98314 NA non-coding upstream 28844 10489579 ~ 10493106 (-)
G98399 NA non-coding upstream 247686 10708421 ~ 10708752 (-)
G98510 NA non-coding upstream 682783 11143518 ~ 11149864 (-)
G98591 NA non-coding upstream 1086900 11547635 ~ 11547875 (-)
G98648 NA non-coding upstream 1985263 12445998 ~ 12446953 (-)
AMCG00015501 NA other downstream 64850 10378285 ~ 10385379 (-)
G98269 taf6l other downstream 109361 10288026 ~ 10340868 (-)
AMCG00015493 zbtb3,LOC107602571 other downstream 251575 10195564 ~ 10198654 (-)
AMCG00015497 NA other downstream 256371 10188842 ~ 10193858 (-)
AMCG00015479 NA other downstream 424210 10018764 ~ 10026019 (-)
AMCG00015519 zmp:0000001168,sipa1,LOC108430456 other upstream 194450 10655185 ~ 10704395 (-)
AMCG00015524 NA other upstream 382950 10843685 ~ 10849421 (-)
AMCG00015532 NA other upstream 551915 11012650 ~ 11237850 (-)
G98502 NA other upstream 553890 11014625 ~ 11245562 (-)
AMCG00015535 NA other upstream 725125 11185860 ~ 11261168 (-)

Expression


Co-expression Network