AMCG00015509


Basic Information

Item Value
gene id AMCG00015509
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 10539920 ~ 10541947 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015509
atggcaaGGAACCTCGACTCGGTTCGCAACTTGCTGAAAGCCCGGGCGTTTTGTTTCCTGTGGCTCGGCTATGTCCTGTACGTCTCGCTGGGCGCGCTGGTGTTCATGGCTCTGGAGCGGCCGGAGGAGAGGGCGCTGCGGGCCGAGGTGCGGGCGCTGCGGCGCGGCTTCCTGCGGGGCCACCAGTGCGTGCGGGAGCGGCGGCTGGACGCGCTGCTGGAGGAGTCGCTGTCCGCCGGGAAGCGCGGCGTGTCGGTGCTGGACGCCAAGAGCCAGGAGTACAACTACGACTTCACCTCGGCGCTGTTTTTTGTCACCACGTTTCTCACGACCACAGgctaTGGCAACACAGTGCCCCTGTCCGACGAGGGGAAGCTGTTCTGCATCATGTACTGCCTGGTGGGCATCCCCCTCACCCTGCTGCTCCTGGCCTGCCTCACTCAGCGCCTGCTGCCCTGGGTGACCCACCGGCCCTTGCAGTATGCCCGGGCCCACTGGGGGGTGGCCCCGGCCCGGCTGGCGCTATACCACGCCCTGGCACTGGCCACCCTCATCTCTGCCCTCTTCTTCCTGCTGCCGGCGGTGGCCTACAGCTGCCTGGAGCCCGACTGGAGCTTCCTGGAGGCGCTGTACTTCTGCTTCATCTCGCTCAGTACCGTGGGGCTGGGGGACTTCCTGCCCGGTCGCACACACGGCCAGGCGGCCAAGCAGGCCTTTGAGTTCGCCACTTCCTGTGAGCAGCGAGGGGGAatgggggtggtggtggaggaAGGAGGGGTATGTTGGGGTTACCTGGTGCTGGGGCTGTTGGCGATGCTGCTGCTACTGGAGACAGTGTGGGAACTTCCCCAGATGCAGGCTGTGATGCGCCTGCTCTCTATCCCACTGCCCTCCCAGCAGGGCCGCCTGACCGTCCTACCCCTGGACGAGCGCATCTTCACAGAGGACCCCCTGCCTCCCACCACTGCCGAGGACACCAGCCCTGCACATGAGCTCCAGTACACCCTCCCCACAGCCACCATCACCCCTGAGCAGCCCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015509 True 1041 mRNA 0.66 3 10539920 10541947

Neighbor

gene id symbol gene type direction distance location
AMCG00015512 NA coding upstream 22881 10512635 ~ 10517039 (+)
AMCG00015505 LOC103385808,LOC107690779,LOC103366237,LOC103033313,LOC102208922 coding upstream 50603 10484942 ~ 10489317 (+)
AMCG00015502 NA coding upstream 96293 10435851 ~ 10443627 (+)
AMCG00015503 NA coding upstream 145290 10390293 ~ 10394630 (+)
AMCG00015498 NA coding upstream 234148 10303739 ~ 10305772 (+)
AMCG00015511 NA coding downstream 1315 10543262 ~ 10546764 (+)
AMCG00015510 sssca1 coding downstream 5829 10547776 ~ 10553456 (+)
AMCG00015513 NA coding downstream 12719 10554666 ~ 10555449 (+)
AMCG00015517 LOC100380650 coding downstream 25562 10567509 ~ 10604062 (+)
AMCG00015516 NA coding downstream 71461 10613408 ~ 10626064 (+)
G98312 NA non-coding upstream 42858 10496836 ~ 10497062 (+)
G98311 NA non-coding upstream 44969 10494524 ~ 10494951 (+)
G98310 NA non-coding upstream 46219 10489908 ~ 10493701 (+)
G98299 NA non-coding upstream 107876 10428585 ~ 10432044 (+)
G98282 NA non-coding upstream 160889 10378607 ~ 10379031 (+)
G98398 NA non-coding downstream 166474 10708421 ~ 10708753 (+)
G98422 NA non-coding downstream 277801 10819748 ~ 10820170 (+)
G98430 NA non-coding downstream 382185 10924132 ~ 10938566 (+)
G98442 NA non-coding downstream 446909 10988856 ~ 11019109 (+)
G98569 NA non-coding downstream 924905 11466852 ~ 11468628 (+)
G98302 NA other upstream 89257 10448166 ~ 10450663 (+)
AMCG00015504 NA other upstream 121220 10411887 ~ 10418700 (+)
G98251 NA other upstream 222595 10316908 ~ 10317325 (+)
AMCG00015492 NA other upstream 317424 10213001 ~ 10222496 (+)
G98093 NA other upstream 453408 10085428 ~ 10086512 (+)
G98402 NA other downstream 194032 10735979 ~ 10741133 (+)
AMCG00015528 NA other downstream 330723 10872670 ~ 11227821 (+)
AMCG00015539 NA other downstream 517543 11059490 ~ 11066855 (+)
AMCG00015544 LOC105903120,LOC107562780,LOC108434861,LOC107691965,LOC106577530,LOC107742298 other downstream 816205 11358152 ~ 11416599 (+)
AMCG00015555 NA other downstream 1892219 12434166 ~ 12462665 (+)

Expression


Co-expression Network