AMCG00015516


Basic Information

Item Value
gene id AMCG00015516
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 10613408 ~ 10626064 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015516
AGCGCCCACATCTGGACAGCCACTGTGAGCGCCCACATCTGGACAGCCACTGTGAGCGCCCACATCTGGACAGCCCGGACTAGGTATCGCTGATCATATCCCCCGGGATGGAGACGCGGAGGCGAGCGGGAGCTGCGGCAGTGCCAGCCCTGTGCGcgttgctgctgctgcagggtcTCCGGGCGCCGGGCACAGGTGGCACCCCCGCGGCGCTGGAAGAAGACCTGCTGAACACCCTGGTGAAGCAAAGACTGGACTGGACGACTTCGCCAAACAAAGCTTGGAAAGAAGTTTCCCTTCCCGTTGTGAGAGCCGCCCCGCACCCGATCTACCAAGCCTGCAACTCCAAGATGAAGGACGTCATCAAAGACCTGACGACTGATTGGATCCCTCGGGGGGATGCCCGTCACCTGTTCCTGGACCTGCAATTCAGTGAAGAGCTGGAGGGTGATGCCCACTACAGCCCATTGGAAGTCTACCTCGTAGAATCAGAATCAGAAATCAGAGGGTTGCGGTGGAGGGATGCCTCCCAAGATCCCCTGGTGTTTCGAGCCAGCCAGCACTTCCAGAGAACATCAGACATCCACGGGATTAGAGAGGCTCTCGAGAATGTCACCGGCCAGGCTCTGGGGCCTCTCTCCAAGGAGGGTTTCCACCTGAGCTTTTCCTACTCCGGGCCATGCCTCATCATCGCCTCAGTCAGGGTGTTCTTCAGGAGATGCCCAGGCTTCACGCAAGACCAGGCCCGATTCAGGTCAGTGGCAGCAGGGTCCGGGCTGGTGCAGGGGTCCTGTGTGGCCAACTCTACCGAGGTGGCCCCCCCCCACAGAGAGTGCCTGGAGGATGGGCACTGGGGGCCCCTACAGGGCCATTGTGTCTGCAGCCCGGGATACCAGCCAGCAGGAAGCTCTTGTGAAGccTGCAGGATCGGACAATATAAGCCAGCGAACGACAGTGGGGCGTGCCGGCCCTGTCCTCCCCACACCAGGACGCACAGCGAGGCAGCTGAGCAGTGccagtgcatgctgggatatTCCCGCATGGCAAGCGACCCCTTTGAGATGGGCTGTACGAAACCTCCAACGGCCCCGAGAAACCTAACCTCCCACTTCCTGAGCCCCTCCTCACTCCTCCTGTCCTGGGAACCACCCTCTGACCTGGGGGGCCGCCGGGAGGTGCTGTACAAGGTACAGTGCTTGGAGAGGGCCGGGGGGAGCAGTTGGGATGACTGTGGGGAAAGTGTCCAGTGGGGATCGGACAGTGAGGGACTGGCAGAGACCGGAGTCAACATCACCGGGCTGCACCCCCGGCGGGACTACCGATTCTCCGTCTGCGCCACCAACACCGTGTCGGACTCCCAGATGGCCCACGCCTCCACCACCACTGTCACCATTAGTCGCTGGACTGACATGCTGACCCTCCCCCCGGTGCAAGAGCCCCTAGGGAAACCCTCGCAGCAGCACTGGGTGTTGTGGGCCTGCCTGGCTGGGGTCCTGGTGCTGGGTTCTGTGGTGGCCATTGCCTGCCTGGCACGAAGAAAGTACCACAAACTGTATCAGGAGCAGGAGGTGGAGCTGCTGCCAATCCAAATGCGAGTGACATACCGCCGGACCGAAGAGGCCAGGCCTGCCCCCCCGCAGGTCAACTTGGGCATCTACAGCCAAGATGACCTGGAGTCCTTCCTGGGGGAGGCGGAGATCATGCGGACCTTTGACCACAGCAACGTGGTCAAACTCCTGGGGGTCGCTCTGGAGGCCAGCGAGGAGGGCTCTGTGCCCGTGCCTCTTGTCATCCTGCCCTTCATGCAGCACGGGGACCTGCGCCGCTTCCTCATTGCCACCCGCTATGGAGACGTGCCCATGTTTGTGCCCTATCAGAGCCTGCTGCGCTTCATGATTGACATCGCCACAGGGATGGAGTACCTCAGCTCACAGGGCTTCCTGCACAGAGACCTGGCGGCCCGCAACTGCATGCTGGGGGACGACCTGCGCGTGTGTGTGGCGGACTTCGGCCTGTCCAAGAAAATCTACAGCAGCAACTACTACCGACAGAGGGTGGCCAAGCGCATGCCGGTGAAGTGGATGGCGATGGAGAGCCTAGCGGAGTCGGTGTTCAGCAGCCGCAGCGACGTGTGGTCGTTCGGGGTGACGATGTGGGAGATCGCGTCCCGTGGCCGGACGCCCTACCCTGGGGTTGACAACCACGAGGTCCTGGACCTGCTGGAGTCAGGTCAGCGGCTGAAGGAACCTGCGGACTGCGACGCCGAGCTGTACACGCTGATGCAGAGCTGCTGGTACAGGGAGCCTGGGCGGCGGCCGGACTTCACCGAGCTGAGGGGGAAGCTGCGTGGTCTGTTGGCGGCCCTGCCCCCTCTTCAGGCCACGGAAGAGGCCCACTACCTCAACCAGGGCCTGGAGGCGGCCGCGTGGGGGGCCGGGGACGGGGAGACGGATGAAATGGCAGGGGCCAGGGGCAACCTTTACCTGTCCAGCCCTGGTGCAGCCCCCCCGCGGGATGAGGAGAGGGACCAGCTGTTAACCAAGGGCCAACTCACCGTCGACCTCCCGTAGGGGAAGCAGGGTGGTTGCATTCAGAAGCCATTTTccttgcattttcattttgatttatttctgcctCTGAGCATCTCATGAGTTTTAAGGGTGTGCTGGCTGTGTCTCGGGTGGGGCCCCCTATGGGACAGGCAGGGACAGTAGGAGTGCTATTCCTCACTGAGAAATCAGACAAGGGTTTGCttagtgtgctgtgctgcactggatggggctccagtctggcccctatactatagtGTCATATTGGAGGCTTGTCATGGTTTGCCAAGCAACAGCACCCCCTTGTGACCTGAATGGCAGCTGCGCATTGTTCTCAACTGTTAAATCCAAAAATCATAACATATCGACCATtctaatgtgtaaataaatacagtattttagtttttagagCTAATAACAGGCCTATATATAAAATGTCTAATTATGCAGTTTGATATCTTATCTAAGGGTTAGTTAGAACAGAAATCTCTGCTGGCCAGGATGCTCAGAAGCAGTGGAGGGGGAATTCTGCTGTCATACTCTTCCTCCTCTATGTTGCACAGTGCACTGGACTACATCCATAAACACAACTGATTGACTATGTACTGGTGATTGTCTGCTGGTTTCTTACTATGTGCTGGGCACCGTGTACTCTTATATATCTGATTTTAATATTCTGATATATTTTTAGTAAAGACAATACCAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015516 True 3260 mRNA 0.59 13 10613408 10626064

Neighbor

gene id symbol gene type direction distance location
AMCG00015517 LOC100380650 coding upstream 9346 10567509 ~ 10604062 (+)
AMCG00015513 NA coding upstream 57959 10554666 ~ 10555449 (+)
AMCG00015510 sssca1 coding upstream 59952 10547776 ~ 10553456 (+)
AMCG00015511 NA coding upstream 66644 10543262 ~ 10546764 (+)
AMCG00015509 NA coding upstream 71461 10539920 ~ 10541947 (+)
AMCG00015522 NA coding downstream 109295 10735359 ~ 10736975 (+)
AMCG00015521 NA coding downstream 113406 10739470 ~ 10742405 (+)
AMCG00015520 LOC106560356 coding downstream 143320 10769384 ~ 10772564 (+)
AMCG00015529 NA coding downstream 285386 10911450 ~ 10922530 (+)
AMCG00015537 NA coding downstream 541223 11167287 ~ 11175559 (+)
G98338 NA non-coding upstream 41518 10529960 ~ 10571890 (+)
G98312 NA non-coding upstream 116346 10496836 ~ 10497062 (+)
G98311 NA non-coding upstream 118457 10494524 ~ 10494951 (+)
G98310 NA non-coding upstream 119707 10489908 ~ 10493701 (+)
G98299 NA non-coding upstream 181364 10428585 ~ 10432044 (+)
G98398 NA non-coding downstream 82357 10708421 ~ 10708753 (+)
G98422 NA non-coding downstream 193684 10819748 ~ 10820170 (+)
G98430 NA non-coding downstream 298068 10924132 ~ 10938566 (+)
G98442 NA non-coding downstream 362792 10988856 ~ 11019109 (+)
G98569 NA non-coding downstream 840788 11466852 ~ 11468628 (+)
G98302 NA other upstream 162745 10448166 ~ 10450663 (+)
AMCG00015504 NA other upstream 194708 10411887 ~ 10418700 (+)
G98251 NA other upstream 296083 10316908 ~ 10317325 (+)
AMCG00015492 NA other upstream 390912 10213001 ~ 10222496 (+)
G98093 NA other upstream 526896 10085428 ~ 10086512 (+)
G98402 NA other downstream 109915 10735979 ~ 10741133 (+)
AMCG00015528 NA other downstream 246606 10872670 ~ 11227821 (+)
AMCG00015539 NA other downstream 433426 11059490 ~ 11066855 (+)
AMCG00015544 LOC105903120,LOC107562780,LOC108434861,LOC107691965,LOC106577530,LOC107742298 other downstream 732088 11358152 ~ 11416599 (+)
AMCG00015555 NA other downstream 1808102 12434166 ~ 12462665 (+)

Expression


Co-expression Network