AMCG00015518



Basic Information


Item Value
gene id AMCG00015518
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information


Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 10634915 ~ 10636279 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence


>AMCG00015518
ATGCCAAGGGGGTTCTTAGTCAAGCGCACCAAAAAGGCCGGTCCCGTGTCCTACCGGGTGCGCCACGGCGGTGAGGAGGCGGCCCCAGTGGCGCAGGGGTTCCCCGCCCCAGCGATGCCTCGCTGCTGGGAGAGTCTGGACAGAGCCGCAGCCTCCCGGCCCACGGCGTGTCCTAGCCTTATCCAGAGCATCAAGAGCCGGATCATTTTCGGGGGGGTGCCCGAAGCTCTCTGCGCCCCCTCGCTCAGCCCGAACCGTCCTGTCAGCGCGGGGTTTGTCCAACAGAACCCCGCCTCTGCAGACTGCTTGGACCGCAAGCTCAACTCGAGCTCCCCGGTCCAAGCCGAGTCCTTCCCGGAGCCTAACCCCTGCTCTTTCATAAGCCTCAGCGGGTCCAAAATGGCTTTTCCCCCTTCCCTTGCCGAGATGACCTCCAAACTGGGGTCGGCGTGCAGTGAGCCCGTCTCGGCCGCCCTGAAGAGAGCCGTCCCCGCTGAACCCAAAGCCAAGCAGCCGCATCCCAAAAAGTCCAAGACCTCCGGCGCCGCCCCCAGCGAGAAGCGACCGAGTTACAGGGACGAGGTCACCAACTCCCCCGTGCTGGGACTGCGCATCAAGGAGGACCCGGAGGAGGACGCCAAGCCTCGCTCCCTCGCCAGCAGCCCCCTCGGGGACCAGGGCAGCAAGAGCCGCGAGTCCAGCACGCCCTCCCCGCAGCCGTCGGACTCGGACGAGGAGCTGTTTTTCGACTGCCCTCAGTGCTGCAAGAAATTCCGGCGCCAAGCCTACCTGCGGAAACACCTGGCGCTCCACAGCCGGCAGGCGCTCAGCGGACAGCCGGCGCAGGTGGAGGGCGGCGCGGAGAAGAAAGCGAGAGCCAGCCAGGGGGTACCCCAAGGCAGCGCCCCCGCCACTGCCCAGGCCGGTGCACTCTACCTCGGCAGGGACTCCCCAGTCCTACCCGCGGGCACACCGAGAGCCCCGGCGGCTGCGGAGCTGTTCCCATGTCGCTTCTGTGGGGAGAATTTCTTCTCCTCCCCGGGACTGACGAGACACATCAACAAGTGCCACCCCACGGAAACGAGACACGTGTTGCTGCTCTCCCAGGCGGCGTTGTGA

Function


GO:

id name namespace
GO:0005634 nucleus cellular_component

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
AMCG00015518 True 1119 mRNA 0.66 2 10634915 10636279

Neighbor


gene id symbol gene type direction distance location
AMCG00015515 bbs1,LOC107579588 coding downstream 96879 10530053 ~ 10538036 (-)
AMCG00015514 NA coding downstream 129696 10493140 ~ 10505219 (-)
AMCG00015508 NA coding downstream 174180 10450229 ~ 10460735 (-)
AMCG00015506 drap1 coding downstream 197905 10431798 ~ 10437010 (-)
AMCG00015507 kat5,LOC106603125,LOC106563454 coding downstream 230059 10394444 ~ 10404856 (-)
AMCG00015526 NA coding upstream 140551 10776830 ~ 10795268 (-)
AMCG00015523 NA coding upstream 162141 10798420 ~ 10803527 (-)
AMCG00015525 NA coding upstream 174250 10810529 ~ 10816296 (-)
AMCG00015527 NA coding upstream 181400 10817679 ~ 10839852 (-)
AMCG00015531 actn3,LOC101158802 coding upstream 288582 10924861 ~ 10941495 (-)
G98314 NA non-coding downstream 141809 10489579 ~ 10493106 (-)
G98216 NA non-coding downstream 412390 10173101 ~ 10222525 (-)
G98211 NA non-coding downstream 469518 10107233 ~ 10165397 (-)
G98163 NA non-coding downstream 559022 10026114 ~ 10075893 (-)
G98138 NA non-coding downstream 696593 9937076 ~ 9938322 (-)
G98399 NA non-coding upstream 72142 10708421 ~ 10708752 (-)
G98510 NA non-coding upstream 507239 11143518 ~ 11149864 (-)
G98591 NA non-coding upstream 911356 11547635 ~ 11547875 (-)
G98648 NA non-coding upstream 1809719 12445998 ~ 12446953 (-)
G98649 NA non-coding upstream 1811309 12447588 ~ 12447829 (-)
AMCG00015501 NA other downstream 249536 10378285 ~ 10385379 (-)
G98269 taf6l other downstream 294047 10288026 ~ 10340868 (-)
AMCG00015493 zbtb3,LOC107602571 other downstream 436261 10195564 ~ 10198654 (-)
AMCG00015497 NA other downstream 441057 10188842 ~ 10193858 (-)
AMCG00015479 NA other downstream 608896 10018764 ~ 10026019 (-)
AMCG00015519 zmp:0000001168,sipa1,LOC108430456 other upstream 18906 10655185 ~ 10704395 (-)
AMCG00015524 NA other upstream 207406 10843685 ~ 10849421 (-)
AMCG00015532 NA other upstream 376371 11012650 ~ 11237850 (-)
G98502 NA other upstream 378346 11014625 ~ 11245562 (-)
AMCG00015535 NA other upstream 549581 11185860 ~ 11261168 (-)

Expression



Co-expression Network