AMCG00015520 (LOC106560356)


Basic Information

Item Value
gene id AMCG00015520
gene name LOC106560356
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 10769384 ~ 10772564 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015520
ATGGAAACTTCAGGATGGGGAGTCACCTGCAGTTCATCCCGTGCTGACAGCCCCGTCCTCGGCCCATCTGGACTGTgtcagggggcggggggggctgcCAGTGTCGAGCAACTGGGAGGATCTGGCTGCATTTGGGCTCTTATCCTCCCAGGCTCTTCAGTGTCGTGGGCTTCAGGCGTGCTGTGCTTTGCATTTaagttgtGCCGTCCGCAGGGATCAcagcccggcccggcccggcccagcCTTCCTCCTCCATCACTCCCCGGCTCCCTCCAGCATGAGCCCCCGAACCACCCCGTGTCCTCGGCCCCGCCCCCAATAGCCATGCCCCTCTCTGACATCATGAACCTGACCTCGCCCGCCCACAATGCCTCCAATGCCAGCTGCGAGGGGCTGGGGAAGCACGCGGTGTGGGAGGTGGTGCTAATCGTCATGGTCACAGGGCCGCTGTCTCTCGTCACCATCATCGGCAACCTGCTGGTCATGGTCTCCTTCCGGGTCAACAGCCACCTGCGCACCGTCAACAACTACTTCCTGCTGAGCCTGGCCTGTGCCGACCTGGTGCTGGGCGCAGTGTCCATGAACCTGTACACCACCTTCATCATCATGGAGTGCTGGGCGCTGGGCCGCCTGGCCTGCGACATCTGGCTGGCATTGGACTATGTGGCCAGCAACGCCTCGGTCATGAACCTGCTGATCATCAGCTTCGACCGCTTCTTCTCCGTCACGCGGCCGCTCACCTACCGGGCCAAGCGCACACCGCGCCGGGCCGCCATCATGATCGGCCTGGCTTGGACCATCTCCTTCCTGCTGTGGGCGCCCGCCATCCTGTTCTGGGAATACGTGGTGGGCAAGCGCACTGTGCTGGACGGGGACTGTGCCATCCAGTTCCTGTCCCAGCCCATCATCACCTTCGGCACAGCCATCGCCGCCTTCTACCTGCCCGTCACCATCATGATCATCCTGTACTGGCGCGTGTACCGTGAGACGGAGAACCGCACACGCGAGCTGGCCGGCCTGCTGGGCTCCACGGCCCCGGAGCACGGGGCACCACCACCGCCCCACAGCTGCAGCAccaagagcagcagcagcagctgcgAGACGCATGGGGGGGCAGACGGCAGCCCAGGCCACGGTGTGCGGGGCTGCCTCTCCTGCCGGCAGGTTCTGCCCCGTAGTCGTACGGCCGCCCCCCGCCAGGCCCAGGCCTTCCTGCAGCCCAGCAGCAACGGCAACTGGCAACTGGAGGAGGACGGCTCTTCTTCCTCTGAGGAGGAGCCCGAGCCAGGGCCCAGGGGAGTTGGTGCCAAGGTGGTCAGGGCCCCATGGGTGCGGGCTGCCGGAGGGGGGAGCCCGGGTGGCTCCGGAGTCCAAGCTGGGGCCAGGGGCTCCTCTCAGGTGGGTGGCCTGGGCCTGCTGGCAGTCAATCCCTCCCCTTCCTTGCCAAAGGCCCCCAAGGCCAAGAAGCGGCGCAACACGTCCCTGATCAAGGAGAAGAAAGCGGCCAAGACTCTGAGCGCCATTCTGCTGGCCTTTATCATCACCTGGACGCCATACAACATCATGGTGCTGGTGTCCACCTTCTGCACCACCTGCGTCCCGGACAAGTTGTGGCAGCTGGGCTACTGGCTGTGCTACGTCAACAGCACAGTCAACCCCATGTGCTACGCCCTCTGCAACAAGTCCTTTCGGATCACCTTCAAGATGCTCCTGCGCTGCCGCTGGGACAAGAGGAAGTGGGGGAAGCCCCACCCCAGTGCCCCGCCCTCCTTCCGGCCCTGCacgtccagcagcagcagtgtctGA

Function

NR:

description
PREDICTED: muscarinic acetylcholine receptor M3-like

GO: NA

KEGG:

id description
K04129 CHRM1; muscarinic acetylcholine receptor M1

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015520 True 1806 mRNA 0.65 2 10769384 10772564

Neighbor

gene id symbol gene type direction distance location
AMCG00015521 NA coding upstream 26979 10739470 ~ 10742405 (+)
AMCG00015522 NA coding upstream 32409 10735359 ~ 10736975 (+)
AMCG00015516 NA coding upstream 143320 10613408 ~ 10626064 (+)
AMCG00015517 LOC100380650 coding upstream 165322 10567509 ~ 10604062 (+)
AMCG00015513 NA coding upstream 213935 10554666 ~ 10555449 (+)
AMCG00015529 NA coding downstream 138886 10911450 ~ 10922530 (+)
AMCG00015537 NA coding downstream 394723 11167287 ~ 11175559 (+)
AMCG00015538 NA coding downstream 564782 11337346 ~ 11342116 (+)
AMCG00015546 NA coding downstream 579407 11351971 ~ 11354018 (+)
AMCG00015547 NA coding downstream 581507 11354071 ~ 11356899 (+)
G98398 NA non-coding upstream 60631 10708421 ~ 10708753 (+)
G98338 NA non-coding upstream 197494 10529960 ~ 10571890 (+)
G98312 NA non-coding upstream 272322 10496836 ~ 10497062 (+)
G98311 NA non-coding upstream 274433 10494524 ~ 10494951 (+)
G98310 NA non-coding upstream 275683 10489908 ~ 10493701 (+)
G98422 NA non-coding downstream 47184 10819748 ~ 10820170 (+)
G98430 NA non-coding downstream 151568 10924132 ~ 10938566 (+)
G98442 NA non-coding downstream 216292 10988856 ~ 11019109 (+)
G98569 NA non-coding downstream 694288 11466852 ~ 11468628 (+)
G98590 NA non-coding downstream 775001 11547565 ~ 11547819 (+)
G98402 NA other upstream 28251 10735979 ~ 10741133 (+)
G98302 NA other upstream 318721 10448166 ~ 10450663 (+)
AMCG00015504 NA other upstream 350684 10411887 ~ 10418700 (+)
G98251 NA other upstream 452059 10316908 ~ 10317325 (+)
AMCG00015492 NA other upstream 546888 10213001 ~ 10222496 (+)
AMCG00015528 NA other downstream 100106 10872670 ~ 11227821 (+)
AMCG00015539 NA other downstream 286926 11059490 ~ 11066855 (+)
AMCG00015544 LOC105903120,LOC107562780,LOC108434861,LOC107691965,LOC106577530,LOC107742298 other downstream 585588 11358152 ~ 11416599 (+)
AMCG00015555 NA other downstream 1661602 12434166 ~ 12462665 (+)
G98759 NA other downstream 2203075 12975639 ~ 13046813 (+)

Expression


Co-expression Network