AMCG00015521


Basic Information

Item Value
gene id AMCG00015521
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 10739470 ~ 10742405 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015521
ATGAAGTTTAACACCCAGATCCACAATTTCCTGGAGCAGCAGCGCCCCGGGGGTGGAACTCCCCGGCTGGTGAATGGCCGGCAGAGGGAGGTGCCTGGGGGAGAGGGACCGCACTCCAATACTTCCATGGTTCTGCTGAGGAAAGCTGGGCACCCAGGGCAGGAGGGCCCGGTGCTGATGGTGGATGAGCTGTTCCGGCTGCACGCGCGGCCCCTGTCCTTCCCTGAAGCCAGCCTGCGCATCATGATCACGCAGCACTTCTCCCCCCGGACCCGCCTCAGCATGGCTGGCCGCATGCTCATCAACGAGGTACCAGCACCGGTCCGGGCCGGGCTACACTGGGCCAGGGGGGGGGAAGGCAGCAGCGTGGGGGGCGGCTCCTGGGCCCTGGAGAACGGGGGGGCCCTGGACAACGAGAGGCAGCTGCTGGAACAGCCTGAGGGGAGCAGGTGCGAGGTGGGGGGCTCAGAAGGGGATGGGGAGGAGGCGGAAGGAGACCCAGTGaagacagaggaagaggaggaggaggaggaggaagaggaagtggaGGGAGTCTTCAGCCCACTCAAGATGCCAGGCGGGCACTGTGAGCGGGTGAAGTGGGCGGTGTCCTGGCCACTGGCGCTGCTGCTGTACTGCACCGTGCCCAACTGTGTGCTGCCACGCTGGCAGCGCTGGTTCATGGCCACCTTCCTGATGTCCACTCTTTGGATCGCCATCTTCTCCTACCTCATGGTCTGGATGGTGACCATCATCAGCTACACCCTGGGCATCCCCGACGTCATCATGGGCATCACCTTCCTGGCAGCCGGCACCAGCGTGCCCGACTGCATGGCCAGCCTCATAGTCGCCCGGCAGGGAATGGGGGACATGGCGGTGTCCAACTCCATCGGTAGCAATGTCTTCGACATCCTGCTGGGACTGGGCTTCCCCTGGGCCCTGCAGACCCTGCTGGTGGACTACGGCTCCTCGGTAGGCCTCCGCTGGGCCAACACTGGCTGTTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015521 True 1005 mRNA 0.65 7 10739470 10742405

Neighbor

gene id symbol gene type direction distance location
AMCG00015522 NA coding upstream 2495 10735359 ~ 10736975 (+)
AMCG00015516 NA coding upstream 113406 10613408 ~ 10626064 (+)
AMCG00015517 LOC100380650 coding upstream 135408 10567509 ~ 10604062 (+)
AMCG00015513 NA coding upstream 184021 10554666 ~ 10555449 (+)
AMCG00015510 sssca1 coding upstream 186014 10547776 ~ 10553456 (+)
AMCG00015520 LOC106560356 coding downstream 26979 10769384 ~ 10772564 (+)
AMCG00015529 NA coding downstream 169045 10911450 ~ 10922530 (+)
AMCG00015537 NA coding downstream 424882 11167287 ~ 11175559 (+)
AMCG00015538 NA coding downstream 594941 11337346 ~ 11342116 (+)
AMCG00015546 NA coding downstream 609566 11351971 ~ 11354018 (+)
G98398 NA non-coding upstream 30717 10708421 ~ 10708753 (+)
G98338 NA non-coding upstream 167580 10529960 ~ 10571890 (+)
G98312 NA non-coding upstream 242408 10496836 ~ 10497062 (+)
G98311 NA non-coding upstream 244519 10494524 ~ 10494951 (+)
G98310 NA non-coding upstream 245769 10489908 ~ 10493701 (+)
G98422 NA non-coding downstream 77343 10819748 ~ 10820170 (+)
G98430 NA non-coding downstream 181727 10924132 ~ 10938566 (+)
G98442 NA non-coding downstream 246451 10988856 ~ 11019109 (+)
G98569 NA non-coding downstream 724447 11466852 ~ 11468628 (+)
G98590 NA non-coding downstream 805160 11547565 ~ 11547819 (+)
G98302 NA other upstream 288807 10448166 ~ 10450663 (+)
AMCG00015504 NA other upstream 320770 10411887 ~ 10418700 (+)
G98251 NA other upstream 422145 10316908 ~ 10317325 (+)
AMCG00015492 NA other upstream 516974 10213001 ~ 10222496 (+)
G98093 NA other upstream 652958 10085428 ~ 10086512 (+)
AMCG00015528 NA other downstream 130265 10872670 ~ 11227821 (+)
AMCG00015539 NA other downstream 317085 11059490 ~ 11066855 (+)
AMCG00015544 LOC105903120,LOC107562780,LOC108434861,LOC107691965,LOC106577530,LOC107742298 other downstream 615747 11358152 ~ 11416599 (+)
AMCG00015555 NA other downstream 1691761 12434166 ~ 12462665 (+)
G98759 NA other downstream 2233234 12975639 ~ 13046813 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000043_00176126_00193756 NA coding CI01000043 null 176076 ~ 194186 (+)