AMCG00015527


Basic Information

Item Value
gene id AMCG00015527
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 10817679 ~ 10839852 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015527
ATGGTCATGTCTATGgtgaAGGAGCCATGTCAGATGGAGCAGATAGCTGGAGTGTCATCATTTCCAACATGTGCCTCATCTAACCCTGCTGTGATGGGACCTGTGGTGCCTGTGACAAGCTCGTATGAAATCAACACGTCAGTCACTGCCGCCAGATTCAGTGACAGCCCCGGCCTcaggagcaggagaggaggTGCCGTATCGCCACTATGTCGCATCAAACCCTGTCTTACCGGCGGCCATGTCTGCGCTGCGTCTCTCCGGCGCCTGATGCGCAGTCGGGTCTGCAGCACCTGCGCAGTTCACACCGCGCCTCCCTCGCCGCGCTGTCAGCGCGCCCTCCAGGGCCTGCAGGCGCGCTTTCATGGCGCCGTTTTCTTCTTTACTTCGCGCTATTTCCAGCTGAAAATCGAAGCCAGGATCCCTTACTCTGGAGATCCCAGTGGGGGACAAGCGGGCCTGAACACCTCCTTAGACATGGAAGCTACATCGCATAATTCACAGCCCCCGCTGGCCGTGCAACAGGCGGTAGAAGAGTCACAAAGCGACGGTCGTCTTTGCTGCGGGTTCAGGCGACTCCAGGAAGCGGACCGGCGAGGCTGCCCCGGATCTCCCCCACGGTCCCCCCTCACCCCCAGGGACGCGGCGATGGCGGCGGACACCACTGAGGCGATTCAGACGGAGCTGAAGACCTTTGACGTGAAATGCGAGGACGAGGAGGTGCTGGACAAAATGGTGGAGCAGTGCATGTCTCACCGGATGAAGGGGGAGGACATCGTTCTGGAGTGGGTGGCCTTCAGCACCACCAAGGGAGGCTGGAGCCTGAGCCTGGACTCCCTGGAGCAGTTTGAGCATGAGGTGAAAGAGGGGTCACCGGTGCTCAATAAGAGGGCCAGTAAGTTCCGGCCCAGCATGCTGAAGAAGGACGTGCGAGTGGGCCAGACCAACAGCCTGGAATCCCTCAAAGACCTGTATCCTCCCAGGGGCGATTGGGGGCACTGA

Function

GO:

id name namespace
GO:0006259 DNA metabolic process biological_process
GO:0006260 DNA replication biological_process
GO:0006261 DNA-dependent DNA replication biological_process
GO:0006269 DNA replication, synthesis of RNA primer biological_process

KEGG:

id description
ko03440 Homologous recombination
ko04110 Cell cycle
ko04111 Cell cycle - yeast
ko04113 Meiosis - yeast

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015527 True 1002 mRNA 0.60 7 10817679 10839852

Neighbor

gene id symbol gene type direction distance location
AMCG00015525 NA coding downstream 1383 10810529 ~ 10816296 (-)
AMCG00015523 NA coding downstream 14152 10798420 ~ 10803527 (-)
AMCG00015526 NA coding downstream 22411 10776830 ~ 10795268 (-)
AMCG00015518 NA coding downstream 181400 10634915 ~ 10636279 (-)
AMCG00015515 bbs1,LOC107579588 coding downstream 279643 10530053 ~ 10538036 (-)
AMCG00015531 actn3,LOC101158802 coding upstream 85009 10924861 ~ 10941495 (-)
AMCG00015530 NA coding upstream 137563 10977415 ~ 10985210 (-)
AMCG00015534 NA coding upstream 150030 10989882 ~ 10994885 (-)
AMCG00015533 NA coding upstream 157697 10997549 ~ 11007375 (-)
AMCG00015536 NA coding upstream 339240 11179092 ~ 11183890 (-)
G98399 NA non-coding downstream 108927 10708421 ~ 10708752 (-)
G98314 NA non-coding downstream 324573 10489579 ~ 10493106 (-)
G98216 NA non-coding downstream 595154 10173101 ~ 10222525 (-)
G98211 NA non-coding downstream 652282 10107233 ~ 10165397 (-)
G98163 NA non-coding downstream 741786 10026114 ~ 10075893 (-)
G98510 NA non-coding upstream 303666 11143518 ~ 11149864 (-)
G98591 NA non-coding upstream 707783 11547635 ~ 11547875 (-)
G98648 NA non-coding upstream 1606146 12445998 ~ 12446953 (-)
G98649 NA non-coding upstream 1607736 12447588 ~ 12447829 (-)
G98650 NA non-coding upstream 1609444 12449296 ~ 12449821 (-)
AMCG00015519 zmp:0000001168,sipa1,LOC108430456 other downstream 113284 10655185 ~ 10704395 (-)
AMCG00015501 NA other downstream 432300 10378285 ~ 10385379 (-)
G98269 taf6l other downstream 476811 10288026 ~ 10340868 (-)
AMCG00015493 zbtb3,LOC107602571 other downstream 619025 10195564 ~ 10198654 (-)
AMCG00015497 NA other downstream 623821 10188842 ~ 10193858 (-)
AMCG00015524 NA other upstream 3833 10843685 ~ 10849421 (-)
AMCG00015532 NA other upstream 172798 11012650 ~ 11237850 (-)
G98502 NA other upstream 174773 11014625 ~ 11245562 (-)
AMCG00015535 NA other upstream 346008 11185860 ~ 11261168 (-)
AMCG00015540 NA other upstream 492811 11332663 ~ 11345490 (-)

Expression


Co-expression Network